Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 MIR3192-201ENST00000584920 77 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 U6.115-201ENST00000636045 103 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 AC073544.1-201ENST00000600110 1595 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 SNORD114-7-201ENST00000362520 77 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 RNA5SP361-201ENST00000362686 118 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 RNU6-1059P-201ENST00000363752 98 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 RNY1-201ENST00000364228 113 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 RNU6-407P-201ENST00000365280 104 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 RNU6-376P-201ENST00000384731 106 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 MIR520G-201ENST00000385064 90 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 RNU6-373P-201ENST00000411247 98 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 USP9YP30-201ENST00000430729 455 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 RNU6-1278P-201ENST00000516130 107 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 AL512605.2-201ENST00000592972 256 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 AC027279.3-201ENST00000625055 122 ntBASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
ECHDC3Q96DC8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 MTND5P16-201ENST00000460269 1703 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 Y_RNA.41-201ENST00000362646 102 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 RNU6-1090P-201ENST00000364065 94 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 RNU6-454P-201ENST00000364292 107 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 RNU4-12P-201ENST00000365233 139 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 Y_RNA.336-201ENST00000365307 109 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 Y_RNA.361-201ENST00000365515 120 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 MIR613-201ENST00000385248 95 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 MIR873-201ENST00000401120 77 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 AL035398.1-201ENST00000430869 322 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 SNORD111.1-201ENST00000516421 86 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 RNU6-1314P-201ENST00000517139 104 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 RNU6-1116P-201ENST00000517269 99 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 AC109635.3-201ENST00000529536 185 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 AL353765.1-201ENST00000605514 183 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 AL442644.1-201ENST00000454390 3105 ntBASIC0.62□□□□□ -2.31
ECHDC3Q96DC8 RNU6-831P-201ENST00000384548 107 ntBASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 MIR489-201ENST00000384923 84 ntBASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 MIR891A-201ENST00000401237 79 ntBASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 RPEP5-201ENST00000441137 268 ntBASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 UQCRBP2-201ENST00000447827 297 ntBASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 RNU6-506P-201ENST00000516553 94 ntBASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 AF250324.2-201ENST00000608299 610 ntBASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 AC127459.3-201ENST00000624328 466 ntBASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 AL008636.1-201ENST00000625038 1018 ntBASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
ECHDC3Q96DC8 AC023934.1-201ENST00000574529 2389 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 RNU1-133P-201ENST00000364867 167 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 MIR190B-201ENST00000401119 79 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 FABP5P4-201ENST00000437203 171 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 SUMO1P2-201ENST00000452524 304 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 AC233266.1-201ENST00000454518 96 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 CYCTP-201ENST00000504253 315 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 RNU6-566P-201ENST00000516790 107 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 AC105029.1-201ENST00000520250 669 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 MTND2P38-201ENST00000522536 667 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 AC018448.1-201ENST00000552843 316 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 AC104465.1-201ENST00000611365 139 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 AC242852.1-201ENST00000612151 96 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 AC104260.1-201ENST00000616660 539 ntBASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.6□□□□□ -2.31
ECHDC3Q96DC8 RNA5SP264-201ENST00000363115 107 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 Y_RNA.243-201ENST00000364481 109 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 Y_RNA.301-201ENST00000364990 103 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 Y_RNA.364-201ENST00000365532 101 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 MIR598-201ENST00000384868 97 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 PCNPP5-201ENST00000452246 481 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 AC098869.1-201ENST00000481627 292 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 RNU6-1096P-201ENST00000517089 102 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 AC120024.3-201ENST00000603167 156 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 AC005014.2-201ENST00000607795 599 ntBASIC0.59□□□□□ -2.31
ECHDC3Q96DC8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
ECHDC3Q96DC8 RNU6-874P-201ENST00000362390 105 ntBASIC0.58□□□□□ -2.32
ECHDC3Q96DC8 Y_RNA.48-201ENST00000362710 103 ntBASIC0.58□□□□□ -2.32
ECHDC3Q96DC8 RNY4P14-201ENST00000363656 96 ntBASIC0.58□□□□□ -2.32
ECHDC3Q96DC8 U8.5-201ENST00000364528 136 ntBASIC0.58□□□□□ -2.32
ECHDC3Q96DC8 Y_RNA.402-201ENST00000383972 102 ntBASIC0.58□□□□□ -2.32
ECHDC3Q96DC8 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
ECHDC3Q96DC8 MIR181A1-201ENST00000385026 110 ntBASIC0.58□□□□□ -2.32
ECHDC3Q96DC8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.58□□□□□ -2.32
ECHDC3Q96DC8 AC113410.1-201ENST00000505029 247 ntBASIC0.58□□□□□ -2.32
ECHDC3Q96DC8 AC024909.2-201ENST00000553035 286 ntBASIC0.58□□□□□ -2.32
ECHDC3Q96DC8 MIR4762-201ENST00000585261 75 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms