Protein–RNA interactions for Protein: Q96CB9

NSUN4, 5-methylcytosine rRNA methyltransferase NSUN4, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN4Q96CB9 U6.115-201ENST00000636045 103 ntBASIC1.63□□□□□ -2.15
NSUN4Q96CB9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
NSUN4Q96CB9 Y_RNA.428-201ENST00000384078 102 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 MIR194-1-201ENST00000384892 85 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 SNORD78.2-201ENST00000391076 69 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 MIR873-201ENST00000401120 77 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 SNX2P2-201ENST00000424553 323 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 RPS29P29-201ENST00000456396 171 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 RNU1-123P-201ENST00000458950 160 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 AC004223.1-201ENST00000479840 271 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 RNA5SP61-201ENST00000516453 100 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 RNU2-56P-201ENST00000516826 190 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 RNU6-902P-201ENST00000517212 91 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 MIR3660-201ENST00000584845 100 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 AL021879.1-201ENST00000611756 288 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 AL157834.3-201ENST00000615543 103 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 U2.1-201ENST00000618978 145 ntBASIC1.62□□□□□ -2.15
NSUN4Q96CB9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.61□□□□□ -2.15
NSUN4Q96CB9 RNU4-79P-201ENST00000362764 141 ntBASIC1.61□□□□□ -2.15
NSUN4Q96CB9 RNU6-867P-201ENST00000364956 107 ntBASIC1.61□□□□□ -2.15
NSUN4Q96CB9 Y_RNA.463-201ENST00000384271 102 ntBASIC1.61□□□□□ -2.15
NSUN4Q96CB9 RNY3P4-201ENST00000384428 101 ntBASIC1.61□□□□□ -2.15
NSUN4Q96CB9 AF228730.4-201ENST00000421457 183 ntBASIC1.61□□□□□ -2.15
NSUN4Q96CB9 PGBD4P5-201ENST00000445958 426 ntBASIC1.61□□□□□ -2.15
NSUN4Q96CB9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.61□□□□□ -2.15
NSUN4Q96CB9 SNORA31.10-201ENST00000516482 106 ntBASIC1.61□□□□□ -2.15
NSUN4Q96CB9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.61□□□□□ -2.15
NSUN4Q96CB9 AL117336.2-201ENST00000602435 335 ntBASIC1.61□□□□□ -2.15
NSUN4Q96CB9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
NSUN4Q96CB9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.61□□□□□ -2.15
NSUN4Q96CB9 MIR302D-201ENST00000362275 68 ntBASIC1.6□□□□□ -2.15
NSUN4Q96CB9 Y_RNA.265-201ENST00000364677 108 ntBASIC1.6□□□□□ -2.15
NSUN4Q96CB9 RNU5E-4P-201ENST00000364931 120 ntBASIC1.6□□□□□ -2.15
NSUN4Q96CB9 AC096644.2-201ENST00000429278 159 ntBASIC1.6□□□□□ -2.15
NSUN4Q96CB9 AC027119.1-201ENST00000440877 241 ntBASIC1.6□□□□□ -2.15
NSUN4Q96CB9 MIR8070-201ENST00000616510 88 ntBASIC1.6□□□□□ -2.15
NSUN4Q96CB9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
NSUN4Q96CB9 MIR337-201ENST00000362281 93 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 Y_RNA.267-201ENST00000364679 109 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 RNU6-53P-201ENST00000365367 106 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 Y_RNA.579-201ENST00000390939 94 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.59□□□□□ -2.15
NSUN4Q96CB9 STAG3L5P-204ENST00000443759 179 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.59□□□□□ -2.15
NSUN4Q96CB9 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 SNORA70.12-201ENST00000516084 153 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 RNU6-911P-201ENST00000516523 104 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 SNORD116.3-201ENST00000517176 78 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 AC023442.1-201ENST00000531247 422 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 AC004467.1-201ENST00000615678 330 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 AC073349.3-201ENST00000617616 186 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 AC127459.3-201ENST00000624328 466 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 AC138305.3-201ENST00000624988 240 ntBASIC1.59□□□□□ -2.15
NSUN4Q96CB9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
NSUN4Q96CB9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.58□□□□□ -2.16
NSUN4Q96CB9 RNU6-1115P-201ENST00000362490 106 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 RNU6-454P-201ENST00000364292 107 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 SNORA40.6-201ENST00000391153 128 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 AC022028.1-201ENST00000412054 408 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 AL135790.2-201ENST00000437701 267 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 AL137792.2-201ENST00000443484 235 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.58□□□□□ -2.16
NSUN4Q96CB9 AC091021.1-201ENST00000468051 388 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 AC099513.1-201ENST00000490423 301 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 Y_RNA.661-201ENST00000516003 99 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 SUMO2P16-201ENST00000519475 264 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 AP002001.1-203ENST00000534002 267 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 AL513423.1-201ENST00000621695 132 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 SNORD3E-202ENST00000627253 216 ntBASIC1.58□□□□□ -2.16
NSUN4Q96CB9 SNORD114-7-201ENST00000362520 77 ntBASIC1.57□□□□□ -2.16
NSUN4Q96CB9 Y_RNA.315-201ENST00000365117 102 ntBASIC1.57□□□□□ -2.16
NSUN4Q96CB9 RNA5SP247-201ENST00000411181 105 ntBASIC1.57□□□□□ -2.16
NSUN4Q96CB9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.57□□□□□ -2.16
NSUN4Q96CB9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.57□□□□□ -2.16
NSUN4Q96CB9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
NSUN4Q96CB9 RNU6-341P-201ENST00000516973 96 ntBASIC1.57□□□□□ -2.16
NSUN4Q96CB9 VN1R91P-201ENST00000594377 169 ntBASIC1.57□□□□□ -2.16
NSUN4Q96CB9 AC005176.2-201ENST00000596933 147 ntBASIC1.57□□□□□ -2.16
NSUN4Q96CB9 AL133255.1-201ENST00000606374 441 ntBASIC1.57□□□□□ -2.16
NSUN4Q96CB9 AC104985.2-201ENST00000620598 500 ntBASIC1.57□□□□□ -2.16
NSUN4Q96CB9 RNU6-961P-201ENST00000363893 105 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 Y_RNA.243-201ENST00000364481 109 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 Y_RNA.496-201ENST00000384444 101 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 MIR520G-201ENST00000385064 90 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 CHEK2P4-201ENST00000450340 246 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 RNU7-28P-201ENST00000516759 62 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 AP002004.2-201ENST00000531656 154 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 AC006600.1-201ENST00000572529 153 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 AL390123.1-201ENST00000603216 237 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 AC005828.6-201ENST00000606610 232 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 AL365434.2-201ENST00000607979 234 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 AL138825.1-201ENST00000618587 192 ntBASIC1.56□□□□□ -2.16
NSUN4Q96CB9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NSUN4Q96CB9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NSUN4Q96CB9 Y_RNA.5-201ENST00000362334 102 ntBASIC1.55□□□□□ -2.16
NSUN4Q96CB9 Y_RNA.27-201ENST00000362540 103 ntBASIC1.55□□□□□ -2.16
NSUN4Q96CB9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.55□□□□□ -2.16
NSUN4Q96CB9 RPS27P16-201ENST00000425758 201 ntBASIC1.55□□□□□ -2.16
NSUN4Q96CB9 RNU6-976P-201ENST00000516086 111 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms