Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 Y_RNA.86-201ENST00000363020 111 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 Y_RNA.184-201ENST00000363884 108 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 Y_RNA.339-201ENST00000365325 102 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 RNU6-1145P-201ENST00000384246 107 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 MIR216A-201ENST00000385063 110 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 MIR548F5-201ENST00000408421 86 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 Y_RNA.594-201ENST00000410373 140 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 USP9YP16-201ENST00000430287 407 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 STAG3L5P-204ENST00000443759 179 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.85□□□□□ -2.27
SHC3Q92529 USP9YP23-201ENST00000455085 407 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 AC046134.1-201ENST00000514454 666 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 Y_RNA.655-201ENST00000515919 96 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 RNU6-197P-201ENST00000516680 100 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 APOOP3-201ENST00000536787 586 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.85□□□□□ -2.27
SHC3Q92529 CYP3A137P-201ENST00000562436 69 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.85□□□□□ -2.27
SHC3Q92529 MIR4778-201ENST00000577635 80 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 AC005730.3-201ENST00000583067 366 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 AC100812.1-201ENST00000607622 580 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 AC018630.2-201ENST00000534866 2403 ntBASIC0.85□□□□□ -2.27
SHC3Q92529 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
SHC3Q92529 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SHC3Q92529 SNORA20B-201ENST00000384220 132 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 SNORD41-201ENST00000386967 70 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 MIR942-201ENST00000401111 86 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 MIR1277-201ENST00000408536 78 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 RPS3AP1-201ENST00000413190 320 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 AC010469.2-201ENST00000496412 480 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 AC018710.1-201ENST00000506509 158 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 AC097462.1-201ENST00000514125 324 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 RNU6-1016P-201ENST00000516689 94 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 Y_RNA.706-201ENST00000516933 99 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 AC136628.3-201ENST00000521868 290 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 AC090617.3-201ENST00000573670 475 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 AC091178.2-201ENST00000584401 117 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 AC007014.2-201ENST00000615581 479 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 AC002553.4-201ENST00000616896 331 ntBASIC0.84□□□□□ -2.27
SHC3Q92529 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SHC3Q92529 MIR190B-201ENST00000401119 79 ntBASIC0.83□□□□□ -2.28
SHC3Q92529 MTCO3P19-201ENST00000415864 321 ntBASIC0.83□□□□□ -2.28
SHC3Q92529 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.83□□□□□ -2.28
SHC3Q92529 RPS3AP52-201ENST00000435639 297 ntBASIC0.83□□□□□ -2.28
SHC3Q92529 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.83□□□□□ -2.28
SHC3Q92529 RPS27P22-201ENST00000478056 241 ntBASIC0.83□□□□□ -2.28
SHC3Q92529 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.83□□□□□ -2.28
SHC3Q92529 RNU6-947P-201ENST00000516264 106 ntBASIC0.83□□□□□ -2.28
SHC3Q92529 AC005828.6-201ENST00000606610 232 ntBASIC0.83□□□□□ -2.28
SHC3Q92529 AC084782.3-201ENST00000612282 578 ntBASIC0.83□□□□□ -2.28
SHC3Q92529 RNU6-454P-201ENST00000364292 107 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 RNU6-593P-201ENST00000364716 112 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 SNORA2.2-201ENST00000365473 135 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 Y_RNA.364-201ENST00000365532 101 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 RNU6-1264P-201ENST00000383891 107 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 Y_RNA.404-201ENST00000383978 102 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 RNU6-318P-201ENST00000384283 103 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 RNY1P4-201ENST00000384595 115 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 Y_RNA.557-201ENST00000384680 107 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 RNU6-510P-201ENST00000391239 108 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 AC114482.1-201ENST00000418010 247 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 AL139396.1-201ENST00000421137 167 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 CALM2P4-201ENST00000430810 426 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 AL353997.1-201ENST00000432936 108 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 RPL7P42-201ENST00000481005 679 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 RNU6-107P-201ENST00000516643 102 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 AF235103.2-201ENST00000525753 346 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.82□□□□□ -2.28
SHC3Q92529 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.82□□□□□ -2.28
SHC3Q92529 MIR3684-201ENST00000579779 74 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 MIR6079-201ENST00000635807 62 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 AC073869.6-201ENST00000640656 341 ntBASIC0.82□□□□□ -2.28
SHC3Q92529 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 RNU6-1050P-201ENST00000410388 107 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.81□□□□□ -2.28
SHC3Q92529 MTND3P8-201ENST00000412909 339 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 AC018865.2-201ENST00000423631 129 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.81□□□□□ -2.28
SHC3Q92529 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.81□□□□□ -2.28
SHC3Q92529 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 AC091021.1-201ENST00000468051 388 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 OR9P1P-201ENST00000496431 281 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 AC074133.1-201ENST00000515696 183 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 AC060780.3-201ENST00000589464 80 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 AC080078.2-201ENST00000603766 501 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 AC009229.3-201ENST00000608056 282 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 AC093913.1-201ENST00000614178 329 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.81□□□□□ -2.28
SHC3Q92529 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SHC3Q92529 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
SHC3Q92529 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
SHC3Q92529 Y_RNA.6-201ENST00000362350 114 ntBASIC0.8□□□□□ -2.28
SHC3Q92529 SNORA27.1-201ENST00000362604 124 ntBASIC0.8□□□□□ -2.28
SHC3Q92529 Y_RNA.88-201ENST00000363029 99 ntBASIC0.8□□□□□ -2.28
SHC3Q92529 RNY1P16-201ENST00000363063 111 ntBASIC0.8□□□□□ -2.28
SHC3Q92529 RNU6-117P-201ENST00000365415 107 ntBASIC0.8□□□□□ -2.28
SHC3Q92529 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 329 ms