Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SNORA74.3-201ENST00000517108 154 ntBASIC0.33□□□□□ -2.36
CLHC1Q8NHS4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.33□□□□□ -2.36
CLHC1Q8NHS4 AC036111.3-201ENST00000526389 112 ntBASIC0.33□□□□□ -2.36
CLHC1Q8NHS4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.33□□□□□ -2.36
CLHC1Q8NHS4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 U8.5-201ENST00000364528 136 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 RNU6-407P-201ENST00000365280 104 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.490-201ENST00000384413 102 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 SNORD111-201ENST00000408139 94 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 RNA5SP193-201ENST00000410353 107 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 ELOCP21-201ENST00000412558 336 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 MRPS18CP6-201ENST00000423587 223 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 AL590632.1-201ENST00000424289 371 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 AC005534.2-201ENST00000431047 433 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.665-201ENST00000516177 98 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 MIR4762-201ENST00000585261 75 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 AC092954.2-201ENST00000609103 430 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 AC127459.3-201ENST00000624328 466 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 AC008133.2-201ENST00000624540 351 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 MTND5P16-201ENST00000460269 1703 ntBASIC0.32□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.372-201ENST00000365599 102 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 RNY1P8-201ENST00000383970 114 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.409-201ENST00000383990 98 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 SNORA36.2-201ENST00000384004 127 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 MIR873-201ENST00000401120 77 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 RNA5SP222-201ENST00000411039 105 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 RNU7-66P-201ENST00000459469 62 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 AC011195.1-201ENST00000578177 177 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 AC121247.2-201ENST00000604776 136 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 AC124303.1-201ENST00000605703 360 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.31□□□□□ -2.36
CLHC1Q8NHS4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 RNU6-1085P-201ENST00000363576 107 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 AC117470.1-201ENST00000381974 330 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 MIR1827-201ENST00000408549 66 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 MIR1298-201ENST00000408783 112 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 MTND3P23-201ENST00000431980 347 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 MTATP6P13-201ENST00000438531 667 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 SUMO1P2-201ENST00000452524 304 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 AC067940.1-201ENST00000458411 300 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 RNU7-41P-201ENST00000515917 61 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 RNU6-1096P-201ENST00000517089 102 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 AF235103.2-201ENST00000525753 346 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 RNU6-94P-201ENST00000607728 107 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 AC019193.3-201ENST00000609144 554 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 U6.115-201ENST00000636045 103 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 MIR924-201ENST00000638017 53 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 AC100810.6-201ENST00000638068 285 ntBASIC0.3□□□□□ -2.36
CLHC1Q8NHS4 SNORA25.3-201ENST00000363205 127 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 RNU6-595P-201ENST00000363944 107 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 RNA5SP48-201ENST00000363969 126 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.405-201ENST00000383979 100 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.451-201ENST00000384200 100 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.524-201ENST00000384564 100 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.553-201ENST00000384670 102 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.561-201ENST00000384694 100 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 MIR520C-201ENST00000385005 87 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 RNU6-1068P-201ENST00000410958 103 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 USMG5P1-201ENST00000425964 177 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 PCNPP5-201ENST00000452246 481 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 AC114811.1-201ENST00000507207 168 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 SNORA68.3-201ENST00000515906 83 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.693-201ENST00000516641 110 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.717-201ENST00000517106 92 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 AC093023.1-201ENST00000547375 507 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 ZNF519P2-201ENST00000557032 169 ntBASIC0.29□□□□□ -2.36
CLHC1Q8NHS4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 RNU6-1297P-201ENST00000384415 104 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 Y_RNA.530-201ENST00000384587 101 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 MIR329-1-201ENST00000385028 80 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 RNA5SP511-201ENST00000410487 115 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 RNU6-177P-201ENST00000411257 104 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 PIGPP3-201ENST00000425307 415 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 AL392103.1-201ENST00000447000 198 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 AC074133.1-201ENST00000515696 183 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 RNU7-43P-201ENST00000516554 64 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 RNU6-256P-201ENST00000516747 97 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 AC023442.1-201ENST00000531247 422 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 AC090617.3-201ENST00000573670 475 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 ZNF299P-201ENST00000406845 1804 ntBASIC0.28□□□□□ -2.36
CLHC1Q8NHS4 SNORD113.3-201ENST00000364630 78 ntBASIC0.27□□□□□ -2.37
CLHC1Q8NHS4 Y_RNA.361-201ENST00000365515 120 ntBASIC0.27□□□□□ -2.37
CLHC1Q8NHS4 RNU6-1145P-201ENST00000384246 107 ntBASIC0.27□□□□□ -2.37
CLHC1Q8NHS4 Y_RNA.533-201ENST00000384596 114 ntBASIC0.27□□□□□ -2.37
CLHC1Q8NHS4 MIR15B-201ENST00000385045 98 ntBASIC0.27□□□□□ -2.37
CLHC1Q8NHS4 MIR136-201ENST00000385207 82 ntBASIC0.27□□□□□ -2.37
CLHC1Q8NHS4 SNORD105-201ENST00000386910 85 ntBASIC0.27□□□□□ -2.37
CLHC1Q8NHS4 EIF1P2-201ENST00000428233 350 ntBASIC0.27□□□□□ -2.37
CLHC1Q8NHS4 USP9YP16-201ENST00000430287 407 ntBASIC0.27□□□□□ -2.37
CLHC1Q8NHS4 SEPT14P3-201ENST00000439401 183 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms