Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.56□□□□□ -2.66
VPS8Q8N3P4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.56□□□□□ -2.66
VPS8Q8N3P4 SNAP23P1-201ENST00000433229 246 ntBASIC-1.56□□□□□ -2.66
VPS8Q8N3P4 MTATP6P26-201ENST00000445926 662 ntBASIC-1.56□□□□□ -2.66
VPS8Q8N3P4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-1.56□□□□□ -2.66
VPS8Q8N3P4 RNU7-156P-201ENST00000517214 74 ntBASIC-1.56□□□□□ -2.66
VPS8Q8N3P4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.56□□□□□ -2.66
VPS8Q8N3P4 AC068587.5-201ENST00000528506 175 ntBASIC-1.56□□□□□ -2.66
VPS8Q8N3P4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.56□□□□□ -2.66
VPS8Q8N3P4 AC012409.4-201ENST00000612923 249 ntBASIC-1.56□□□□□ -2.66
VPS8Q8N3P4 RNU6-226P-201ENST00000363778 107 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 RNU6-873P-201ENST00000363833 107 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 RNU2-54P-201ENST00000410299 190 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 SNORA18.4-201ENST00000516440 124 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 AC093726.3-201ENST00000637588 150 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 MIR125B2-201ENST00000385128 89 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 MIR204-201ENST00000385200 110 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 RNU6-607P-201ENST00000411283 108 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 AL031779.1-201ENST00000415663 330 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 AC117522.1-201ENST00000509821 380 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 AC107027.2-201ENST00000512197 115 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 AC046134.1-201ENST00000514454 666 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 RNU6-504P-201ENST00000516568 104 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.57□□□□□ -2.66
VPS8Q8N3P4 AC073343.1-201ENST00000328239 651 ntBASIC-1.58□□□□□ -2.66
VPS8Q8N3P4 RNU6-137P-201ENST00000363680 108 ntBASIC-1.58□□□□□ -2.66
VPS8Q8N3P4 RPS29P13-201ENST00000402041 169 ntBASIC-1.58□□□□□ -2.66
VPS8Q8N3P4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.58□□□□□ -2.66
VPS8Q8N3P4 AC091959.1-201ENST00000495857 238 ntBASIC-1.58□□□□□ -2.66
VPS8Q8N3P4 RNA5SP454-201ENST00000517231 127 ntBASIC-1.58□□□□□ -2.66
VPS8Q8N3P4 RNU1-29P-201ENST00000606574 126 ntBASIC-1.58□□□□□ -2.66
VPS8Q8N3P4 AC144521.1-201ENST00000607148 956 ntBASIC-1.58□□□□□ -2.66
VPS8Q8N3P4 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.59□□□□□ -2.66
VPS8Q8N3P4 SNORD45.3-201ENST00000363836 72 ntBASIC-1.59□□□□□ -2.66
VPS8Q8N3P4 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.59□□□□□ -2.66
VPS8Q8N3P4 RNU6-47P-201ENST00000383866 107 ntBASIC-1.59□□□□□ -2.66
VPS8Q8N3P4 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.59□□□□□ -2.66
VPS8Q8N3P4 SNORA75.1-201ENST00000391130 148 ntBASIC-1.59□□□□□ -2.66
VPS8Q8N3P4 SNORD123-201ENST00000459473 70 ntBASIC-1.59□□□□□ -2.66
VPS8Q8N3P4 AC023158.2-201ENST00000614876 543 ntBASIC-1.59□□□□□ -2.66
VPS8Q8N3P4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.59□□□□□ -2.66
VPS8Q8N3P4 AC099786.3-201ENST00000565735 1410 ntBASIC-1.6□□□□□ -2.67
VPS8Q8N3P4 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.6□□□□□ -2.67
VPS8Q8N3P4 MIR320B2-201ENST00000408479 138 ntBASIC-1.6□□□□□ -2.67
VPS8Q8N3P4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.6□□□□□ -2.67
VPS8Q8N3P4 AC114878.1-201ENST00000441166 358 ntBASIC-1.6□□□□□ -2.67
VPS8Q8N3P4 AC105417.1-201ENST00000514691 285 ntBASIC-1.6□□□□□ -2.67
VPS8Q8N3P4 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.6□□□□□ -2.67
VPS8Q8N3P4 RNA5SP33-201ENST00000516687 98 ntBASIC-1.6□□□□□ -2.67
VPS8Q8N3P4 SNORD92-201ENST00000585078 85 ntBASIC-1.6□□□□□ -2.67
VPS8Q8N3P4 U7.6-201ENST00000610841 64 ntBASIC-1.6□□□□□ -2.67
VPS8Q8N3P4 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.61□□□□□ -2.67
VPS8Q8N3P4 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.61□□□□□ -2.67
VPS8Q8N3P4 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.61□□□□□ -2.67
VPS8Q8N3P4 SNORA26.5-201ENST00000391215 123 ntBASIC-1.61□□□□□ -2.67
VPS8Q8N3P4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.61□□□□□ -2.67
VPS8Q8N3P4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.61□□□□□ -2.67
VPS8Q8N3P4 snoU13.6-201ENST00000458785 104 ntBASIC-1.61□□□□□ -2.67
VPS8Q8N3P4 AC026421.1-201ENST00000519101 163 ntBASIC-1.61□□□□□ -2.67
VPS8Q8N3P4 FRG2DP-202ENST00000566967 323 ntBASIC-1.61□□□□□ -2.67
VPS8Q8N3P4 OR4H6P-202ENST00000603819 340 ntBASIC-1.61□□□□□ -2.67
VPS8Q8N3P4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 SNORD115-42-201ENST00000364273 82 ntBASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 RNU4-66P-201ENST00000365199 138 ntBASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 AC006600.1-201ENST00000572529 153 ntBASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 AC138207.3-201ENST00000585289 166 ntBASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 AC008521.1-201ENST00000587471 187 ntBASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 MTATP6P2-201ENST00000603319 678 ntBASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.62□□□□□ -2.67
VPS8Q8N3P4 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.63□□□□□ -2.67
VPS8Q8N3P4 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.63□□□□□ -2.67
VPS8Q8N3P4 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.63□□□□□ -2.67
VPS8Q8N3P4 MT-TY-201ENST00000387409 66 ntBASIC-1.63□□□□□ -2.67
VPS8Q8N3P4 AC004866.1-201ENST00000411748 78 ntBASIC-1.63□□□□□ -2.67
VPS8Q8N3P4 AL353572.1-201ENST00000442490 417 ntBASIC-1.63□□□□□ -2.67
VPS8Q8N3P4 RNU7-51P-201ENST00000516560 62 ntBASIC-1.63□□□□□ -2.67
VPS8Q8N3P4 MIR5591-201ENST00000578248 65 ntBASIC-1.63□□□□□ -2.67
VPS8Q8N3P4 MIR5706-201ENST00000579841 80 ntBASIC-1.63□□□□□ -2.67
VPS8Q8N3P4 AC011458.1-201ENST00000604034 617 ntBASIC-1.63□□□□□ -2.67
VPS8Q8N3P4 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.64□□□□□ -2.67
VPS8Q8N3P4 MIR215-201ENST00000384858 110 ntBASIC-1.64□□□□□ -2.67
VPS8Q8N3P4 MIR1284-201ENST00000408337 120 ntBASIC-1.64□□□□□ -2.67
VPS8Q8N3P4 MRPS10P1-201ENST00000448483 130 ntBASIC-1.64□□□□□ -2.67
VPS8Q8N3P4 AC010493.1-201ENST00000513479 292 ntBASIC-1.64□□□□□ -2.67
VPS8Q8N3P4 RNU7-172P-201ENST00000517125 64 ntBASIC-1.64□□□□□ -2.67
VPS8Q8N3P4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.64□□□□□ -2.67
VPS8Q8N3P4 MIR4264-201ENST00000583520 66 ntBASIC-1.64□□□□□ -2.67
VPS8Q8N3P4 AC134878.1-201ENST00000619901 243 ntBASIC-1.64□□□□□ -2.67
VPS8Q8N3P4 SNORA43.4-201ENST00000629559 138 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms