Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AP002004.2-201ENST00000531656 154 ntBASIC1.47□□□□□ -2.17
PRPF39Q86UA1 AL512310.8-201ENST00000550183 120 ntBASIC1.47□□□□□ -2.17
PRPF39Q86UA1 CYP3A52P-201ENST00000563326 91 ntBASIC1.47□□□□□ -2.17
PRPF39Q86UA1 MIR4778-201ENST00000577635 80 ntBASIC1.47□□□□□ -2.17
PRPF39Q86UA1 MIR4421-201ENST00000578133 69 ntBASIC1.47□□□□□ -2.17
PRPF39Q86UA1 7SK.8-201ENST00000612110 250 ntBASIC1.47□□□□□ -2.17
PRPF39Q86UA1 7SK.11-201ENST00000615477 250 ntBASIC1.47□□□□□ -2.17
PRPF39Q86UA1 MIR8065-201ENST00000620577 100 ntBASIC1.47□□□□□ -2.17
PRPF39Q86UA1 7SK.13-201ENST00000622040 250 ntBASIC1.47□□□□□ -2.17
PRPF39Q86UA1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 RNU4-76P-201ENST00000364509 141 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 RNU6-136P-201ENST00000384663 107 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 MIR660-201ENST00000385235 97 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 SNORD78.2-201ENST00000391076 69 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 RNY4P36-201ENST00000391116 96 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 RN7SKP51-201ENST00000410781 304 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 RPL30P13-201ENST00000418873 348 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 MTCO2P27-201ENST00000420740 428 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.46□□□□□ -2.18
PRPF39Q86UA1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.46□□□□□ -2.18
PRPF39Q86UA1 RPL30P7-201ENST00000479312 323 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 RNU7-28P-201ENST00000516759 62 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 AC084781.2-201ENST00000615568 161 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 U2.1-201ENST00000618978 145 ntBASIC1.46□□□□□ -2.18
PRPF39Q86UA1 RNU6-961P-201ENST00000363893 105 ntBASIC1.45□□□□□ -2.18
PRPF39Q86UA1 MIR520G-201ENST00000385064 90 ntBASIC1.45□□□□□ -2.18
PRPF39Q86UA1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.45□□□□□ -2.18
PRPF39Q86UA1 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
PRPF39Q86UA1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.45□□□□□ -2.18
PRPF39Q86UA1 ELOCP24-201ENST00000456370 334 ntBASIC1.45□□□□□ -2.18
PRPF39Q86UA1 SNORA70.12-201ENST00000516084 153 ntBASIC1.45□□□□□ -2.18
PRPF39Q86UA1 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
PRPF39Q86UA1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.45□□□□□ -2.18
PRPF39Q86UA1 U8.1-201ENST00000362843 134 ntBASIC1.44□□□□□ -2.18
PRPF39Q86UA1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.44□□□□□ -2.18
PRPF39Q86UA1 RNY3P4-201ENST00000384428 101 ntBASIC1.44□□□□□ -2.18
PRPF39Q86UA1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
PRPF39Q86UA1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.44□□□□□ -2.18
PRPF39Q86UA1 RNU6-277P-201ENST00000516272 106 ntBASIC1.44□□□□□ -2.18
PRPF39Q86UA1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.44□□□□□ -2.18
PRPF39Q86UA1 AC019288.1-201ENST00000557918 224 ntBASIC1.44□□□□□ -2.18
PRPF39Q86UA1 AC005176.2-201ENST00000596933 147 ntBASIC1.44□□□□□ -2.18
PRPF39Q86UA1 AL132765.2-201ENST00000610812 351 ntBASIC1.44□□□□□ -2.18
PRPF39Q86UA1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
PRPF39Q86UA1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
PRPF39Q86UA1 SNORA1B-201ENST00000362535 133 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 RNU6-1040P-201ENST00000383974 107 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 AC096644.2-201ENST00000429278 159 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 RPL39P38-201ENST00000467018 153 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 AC092991.1-201ENST00000477176 376 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 RNA5SP168-201ENST00000516642 112 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 RNU6-63P-201ENST00000516690 95 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 RNU6-699P-201ENST00000517081 110 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 Y_RNA.718-201ENST00000517110 102 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 RAB11AP2-201ENST00000545905 639 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 AL355375.2-201ENST00000574825 175 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 AC091178.2-201ENST00000584401 117 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 AC005828.6-201ENST00000606610 232 ntBASIC1.43□□□□□ -2.18
PRPF39Q86UA1 RNU6-324P-201ENST00000363957 106 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 Y_RNA.356-201ENST00000365475 113 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 Y_RNA.428-201ENST00000384078 102 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 SNORD116-29-201ENST00000384516 83 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 SNORA12.1-201ENST00000390873 148 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 RNU6-1009P-201ENST00000390996 107 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 RNA5SP482-201ENST00000391269 118 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 CALM2P4-201ENST00000430810 426 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 AL049830.1-201ENST00000468034 425 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 AC091951.2-201ENST00000500762 203 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 RNU7-12P-201ENST00000516030 62 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 RNU6-922P-201ENST00000516753 99 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 MIR3664-201ENST00000579074 99 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
PRPF39Q86UA1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
PRPF39Q86UA1 SNORD114-7-201ENST00000362520 77 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 RNU6-199P-201ENST00000362954 107 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 RNU6-505P-201ENST00000384427 107 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 MIR559-201ENST00000385188 96 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 RPS29P29-201ENST00000456396 171 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 SNORD116.3-201ENST00000517176 78 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 RNU2-12P-201ENST00000517216 168 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 AC006600.1-201ENST00000572529 153 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 MIR4659A-201ENST00000580269 81 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 AC011476.5-201ENST00000615594 130 ntBASIC1.41□□□□□ -2.18
PRPF39Q86UA1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PRPF39Q86UA1 AC005592.1-201ENST00000566527 1640 ntBASIC1.4□□□□□ -2.18
PRPF39Q86UA1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.70-201ENST00000362886 110 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 SNORD115-30-201ENST00000364117 82 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 RNU6-117P-201ENST00000365415 107 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 RNU6-20P-201ENST00000384106 107 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 RNU6-424P-201ENST00000384367 105 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 262.2 ms