Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 AC064859.1-201ENST00000624741 174 ntBASIC2.34□□□□□ -2.03
YTHDF3Q7Z739 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 U8.2-201ENST00000363156 134 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 RNU6-1027P-201ENST00000383998 107 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 SNORA20B-201ENST00000384220 132 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 SNORA8.3-201ENST00000384679 139 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 RNU6-578P-201ENST00000390980 103 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 MIR300-201ENST00000401138 83 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 MIR1294-201ENST00000408503 142 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 RPL30P4-201ENST00000429309 333 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 RPS20P10-201ENST00000451209 253 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 RNU6-717P-201ENST00000459076 104 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 RNU7-57P-201ENST00000459540 60 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 RNU6-237P-201ENST00000515985 71 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 RNA5SP148-201ENST00000516527 94 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 AC109329.2-201ENST00000519658 482 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 AC018630.3-201ENST00000542637 96 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 MIR3684-201ENST00000579779 74 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 SNORD53-201ENST00000579969 78 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 AC090616.3-201ENST00000582184 217 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 MIR4448-201ENST00000584360 86 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 AC002984.1-201ENST00000591692 448 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 AP001485.1-201ENST00000604799 199 ntBASIC2.33□□□□□ -2.04
YTHDF3Q7Z739 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 AL159152.1-201ENST00000635019 2587 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 AC016717.2-201ENST00000609089 5141 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 Y_RNA.24-201ENST00000362508 103 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 RNU6-103P-201ENST00000363686 107 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 Y_RNA.293-201ENST00000364908 93 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 U8.7-201ENST00000364940 136 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 RNA5SP138-201ENST00000365098 114 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 RNU6-234P-201ENST00000365229 104 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 CD24P4-201ENST00000382840 243 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 RNU6-975P-201ENST00000384296 105 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 Y_RNA.568-201ENST00000384742 113 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 MIR526A2-201ENST00000390198 65 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 RNU6-239P-201ENST00000390990 99 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 MIR873-201ENST00000401120 77 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 RNA5SP338-201ENST00000410495 85 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 EBAG9P1-201ENST00000418955 543 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 snoU13.26-201ENST00000459452 105 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 RNU6-221P-201ENST00000459541 99 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 Y_RNA.797-201ENST00000515977 94 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 SNORA70.12-201ENST00000516084 153 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 RNU1-41P-201ENST00000516161 162 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 RNU1-48P-201ENST00000516400 162 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 SNORD116-25-201ENST00000516517 92 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 Y_RNA.802-201ENST00000614892 130 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 AC012640.5-201ENST00000623897 319 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.32□□□□□ -2.04
YTHDF3Q7Z739 SNORA27.1-201ENST00000362604 124 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 Y_RNA.215-201ENST00000364204 112 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 SNORD31B-201ENST00000364977 69 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 RNU6-969P-201ENST00000383900 105 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 SNORD14D-201ENST00000384390 87 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 SNORD116-13-201ENST00000384408 92 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 MIR616-201ENST00000385293 97 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 AL162725.1-201ENST00000435405 301 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 SNORD65B-201ENST00000459126 73 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 RNU6-1337P-201ENST00000516525 95 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 MIR4431-201ENST00000579990 94 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 Y_RNA.778-201ENST00000620203 90 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 snoZ196.1-201ENST00000625269 89 ntBASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
YTHDF3Q7Z739 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 RNU6-1205P-201ENST00000363625 106 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 Y_RNA.357-201ENST00000365487 109 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 MIR569-201ENST00000385228 96 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 AC016717.1-201ENST00000448918 286 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 HSPE1P13-201ENST00000451143 297 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 AC016925.1-201ENST00000458303 298 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 RPS29P12-201ENST00000460178 152 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 AC090515.1-201ENST00000465295 476 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 RNU6-586P-201ENST00000517265 104 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 AC109810.1-201ENST00000534066 224 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 MIR5688-201ENST00000580619 83 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 MIR4524B-201ENST00000581569 115 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 MIR1248-201ENST00000629190 106 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 MIR7515-201ENST00000637837 67 ntBASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.3□□□□□ -2.04
YTHDF3Q7Z739 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms