Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RNU6-91P-201ENST00000607774 107 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 TUG1_4.1-201ENST00000619464 181 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 AP001340.1-201ENST00000624405 217 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 MTND5P35-201ENST00000557537 1720 ntBASIC2.19□□□□□ -2.06
USP43Q70EL4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.19□□□□□ -2.06
USP43Q70EL4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 RNU5F-3P-201ENST00000363767 117 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 RNU6-454P-201ENST00000364292 107 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 Y_RNA.329-201ENST00000365209 107 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 RNU6-748P-201ENST00000384648 107 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 SNORA40.19-201ENST00000390846 128 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 MIR513C-201ENST00000401352 84 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 snoU13.14-201ENST00000459372 104 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 RNU6-625P-201ENST00000459412 107 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 AC091179.3-201ENST00000474761 144 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 RN7SKP164-201ENST00000516138 266 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 RNU2-12P-201ENST00000517216 168 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 AC109810.1-201ENST00000534066 224 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.18□□□□□ -2.06
USP43Q70EL4 AC025281.1-201ENST00000567026 265 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 AL356280.1-201ENST00000603614 379 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 SNORD98-201ENST00000636377 67 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USP43Q70EL4 ZNF658B-202ENST00000615961 3375 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 AC134026.1-201ENST00000623249 2239 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
USP43Q70EL4 ZNF702P-202ENST00000434269 1966 ntBASIC2.18□□□□□ -2.06
USP43Q70EL4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
USP43Q70EL4 RNU6-1010P-201ENST00000362757 107 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNU6-529P-201ENST00000363383 104 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNU6-103P-201ENST00000363686 107 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 Y_RNA.179-201ENST00000363844 90 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 SNORD114-30-201ENST00000364448 72 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNU1-52P-201ENST00000384190 164 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNU6-793P-201ENST00000384233 104 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNU6-476P-201ENST00000384726 107 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNU6-376P-201ENST00000384731 106 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 MIR549A-201ENST00000385268 96 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNU6-750P-201ENST00000390946 107 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNA5SP201-201ENST00000410316 124 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.17□□□□□ -2.06
USP43Q70EL4 AIMP1P2-201ENST00000425294 312 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.17□□□□□ -2.06
USP43Q70EL4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.17□□□□□ -2.06
USP43Q70EL4 AC012308.1-201ENST00000451232 178 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 AC107027.2-201ENST00000512197 115 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNU6-561P-201ENST00000516222 102 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNU6-155P-201ENST00000516347 100 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 RNA5SP148-201ENST00000516527 94 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 AC136628.3-201ENST00000521868 290 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.17□□□□□ -2.06
USP43Q70EL4 RPS15AP11-201ENST00000594193 385 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 AL391813.1-201ENST00000603098 260 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.17□□□□□ -2.06
USP43Q70EL4 AC013791.1-201ENST00000616619 62 ntBASIC2.17□□□□□ -2.06
USP43Q70EL4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USP43Q70EL4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
USP43Q70EL4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USP43Q70EL4 AC010889.1-201ENST00000566193 2666 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 RNU1-62P-201ENST00000362599 164 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 U8.2-201ENST00000363156 134 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 RNU6-19P-201ENST00000384718 107 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 MIR504-201ENST00000385065 83 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 SNORA40.5-201ENST00000391061 128 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 U3.40-201ENST00000408706 208 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 RNA5SP89-201ENST00000410300 108 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 AC096649.2-201ENST00000416186 393 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 AL158823.1-201ENST00000418441 478 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 RPS20P10-201ENST00000451209 253 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.16□□□□□ -2.06
USP43Q70EL4 MRPS36P2-201ENST00000512569 299 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.16□□□□□ -2.06
USP43Q70EL4 AC009127.3-201ENST00000570531 403 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 U4.3-201ENST00000621047 82 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 MIR7843-201ENST00000622274 79 ntBASIC2.16□□□□□ -2.06
USP43Q70EL4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USP43Q70EL4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
USP43Q70EL4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.15□□□□□ -2.06
USP43Q70EL4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
USP43Q70EL4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
USP43Q70EL4 Y_RNA.309-201ENST00000365046 111 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 Y_RNA.337-201ENST00000365312 102 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 Y_RNA.498-201ENST00000384460 102 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 CBX3P9-201ENST00000402326 552 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 AL135786.1-201ENST00000415892 214 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 AC063976.4-201ENST00000421971 163 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.15□□□□□ -2.07
USP43Q70EL4 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 MIR3923-201ENST00000579521 83 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 AL034555.1-201ENST00000604816 211 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 AC067747.1-201ENST00000608026 250 ntBASIC2.15□□□□□ -2.07
USP43Q70EL4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms