Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 AP000753.3-201ENST00000604083 169 ntBASIC-0.44□□□□□ -2.48
USP54Q70EL1 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.44□□□□□ -2.48
USP54Q70EL1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
USP54Q70EL1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-929P-201ENST00000384429 107 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 MIR635-201ENST00000384830 98 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-747P-201ENST00000390928 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-241P-201ENST00000391148 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-447P-201ENST00000410293 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-355P-201ENST00000410427 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-791P-201ENST00000410467 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-705P-201ENST00000410601 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-860P-201ENST00000410860 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU6-785P-201ENST00000411324 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 AC096531.1-201ENST00000419107 107 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU7-159P-201ENST00000459284 62 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.45□□□□□ -2.48
USP54Q70EL1 HIF1AP1-201ENST00000553642 175 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.45□□□□□ -2.48
USP54Q70EL1 MIR4762-201ENST00000585261 75 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.45□□□□□ -2.48
USP54Q70EL1 U6.90-201ENST00000614007 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 U6.70-201ENST00000620287 104 ntBASIC-0.45□□□□□ -2.48
USP54Q70EL1 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 RNU6-407P-201ENST00000365280 104 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 AL049545.1-201ENST00000401856 572 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 AC098592.1-201ENST00000419352 333 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 AC104850.1-201ENST00000435940 476 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.46□□□□□ -2.48
USP54Q70EL1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.46□□□□□ -2.48
USP54Q70EL1 AC005178.1-201ENST00000508392 440 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 MIR4771-2-201ENST00000577758 74 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 MIR4771-1-201ENST00000582617 74 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 RNU6-660P-201ENST00000364566 109 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 RNU2-29P-201ENST00000410423 189 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 RNU7-167P-201ENST00000459160 62 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 SNORD123-201ENST00000459473 70 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 RNU6-782P-201ENST00000516852 104 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.46□□□□□ -2.48
USP54Q70EL1 MIR4703-201ENST00000577728 79 ntBASIC-0.46□□□□□ -2.48
USP54Q70EL1 RNU6-727P-201ENST00000363592 107 ntBASIC-0.47□□□□□ -2.48
USP54Q70EL1 MIR15B-201ENST00000385045 98 ntBASIC-0.47□□□□□ -2.48
USP54Q70EL1 AL355143.1-201ENST00000407101 841 ntBASIC-0.47□□□□□ -2.48
USP54Q70EL1 MLLT10P1-201ENST00000418346 262 ntBASIC-0.47□□□□□ -2.48
USP54Q70EL1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.47□□□□□ -2.48
USP54Q70EL1 RNU6-448P-201ENST00000517052 107 ntBASIC-0.47□□□□□ -2.48
USP54Q70EL1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.47□□□□□ -2.48
USP54Q70EL1 RPL23AP91-201ENST00000569211 455 ntBASIC-0.47□□□□□ -2.48
USP54Q70EL1 AC010608.3-201ENST00000625048 527 ntBASIC-0.47□□□□□ -2.48
USP54Q70EL1 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.48□□□□□ -2.49
USP54Q70EL1 RNU6-125P-201ENST00000384505 107 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 RNU6-83P-201ENST00000384568 112 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 RNU6-136P-201ENST00000384663 107 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 RNU2-54P-201ENST00000410299 190 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.48□□□□□ -2.49
USP54Q70EL1 AC092447.3-201ENST00000426027 686 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 MTND4P32-201ENST00000437189 1237 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 RNU7-165P-201ENST00000458864 60 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 AC074198.2-201ENST00000508153 258 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 AC007751.1-201ENST00000529260 376 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 MIR3682-201ENST00000581338 84 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 MIR4676-201ENST00000583078 72 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 AC064836.2-201ENST00000609491 462 ntBASIC-0.48□□□□□ -2.49
USP54Q70EL1 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 SNORA20B-201ENST00000384220 132 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 MIR224-201ENST00000384889 81 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 MIR125B2-201ENST00000385128 89 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 RNU6-269P-201ENST00000391077 97 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.49□□□□□ -2.49
USP54Q70EL1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.49□□□□□ -2.49
USP54Q70EL1 SCOCP1-201ENST00000554676 349 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 AGGF1P4-201ENST00000568249 801 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 MIR4264-201ENST00000583520 66 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 MIR8064-201ENST00000612863 90 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 uc_338.4-201ENST00000616635 176 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 RNU6-873P-201ENST00000363833 107 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 RNU6-903P-201ENST00000391270 109 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 AL590002.1-201ENST00000406554 418 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 RPS29P15-201ENST00000458329 171 ntBASIC-0.49□□□□□ -2.49
USP54Q70EL1 AC138869.1-201ENST00000568623 124 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms