Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNA5SP148-201ENST00000516527 94 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 RNA5SP481-201ENST00000516814 122 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 SNORA31.17-201ENST00000516953 127 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 AC136628.3-201ENST00000521868 290 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF220Q5VTB9 AC015720.1-201ENST00000565251 277 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 MIR4299-201ENST00000577899 72 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 AC022217.4-201ENST00000604389 163 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 AC005972.2-201ENST00000604690 348 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 AC004832.4-201ENST00000608952 331 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.17□□□□□ -2.06
RNF220Q5VTB9 U4.1-201ENST00000620349 87 ntBASIC2.17□□□□□ -2.06
RNF220Q5VTB9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.17□□□□□ -2.06
RNF220Q5VTB9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNF220Q5VTB9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.111-201ENST00000363248 100 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 SNORA5B-201ENST00000363786 132 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 Y_RNA.288-201ENST00000364854 92 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 RNU6-463P-201ENST00000384340 107 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF220Q5VTB9 RPS27P1-201ENST00000450552 247 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 AC091021.1-201ENST00000468051 388 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 RPL23AP63-201ENST00000498752 471 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 AC234781.5-201ENST00000508429 271 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 RNU6-341P-201ENST00000516973 96 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF220Q5VTB9 AC091178.2-201ENST00000584401 117 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF220Q5VTB9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.16□□□□□ -2.06
RNF220Q5VTB9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.16□□□□□ -2.06
RNF220Q5VTB9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
RNF220Q5VTB9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
RNF220Q5VTB9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RNF220Q5VTB9 Y_RNA.144-201ENST00000363521 113 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 Y_RNA.518-201ENST00000384552 113 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 RNU6-950P-201ENST00000384651 107 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 AC245047.3-201ENST00000429428 127 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF220Q5VTB9 RNA5SP233-201ENST00000459153 113 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 AC091959.1-201ENST00000495857 238 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 SNORA27.4-201ENST00000516650 95 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 RNA5SP364-201ENST00000516938 78 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 RNA5SP437-201ENST00000517249 129 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 AC021269.2-201ENST00000532318 330 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 7SK.10-201ENST00000621414 298 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 uc_338.20-201ENST00000621563 178 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF220Q5VTB9 CTSLP2-204ENST00000629029 392 ntBASIC2.15□□□□□ -2.07
RNF220Q5VTB9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF220Q5VTB9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.15□□□□□ -2.07
RNF220Q5VTB9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.14□□□□□ -2.07
RNF220Q5VTB9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RNF220Q5VTB9 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
RNF220Q5VTB9 AL135786.1-201ENST00000415892 214 ntBASIC2.14□□□□□ -2.07
RNF220Q5VTB9 HSPE1P21-201ENST00000438283 308 ntBASIC2.14□□□□□ -2.07
RNF220Q5VTB9 HSPE1P9-201ENST00000440046 311 ntBASIC2.14□□□□□ -2.07
RNF220Q5VTB9 AL606517.2-201ENST00000442855 241 ntBASIC2.14□□□□□ -2.07
RNF220Q5VTB9 RPS27P21-201ENST00000486977 252 ntBASIC2.14□□□□□ -2.07
RNF220Q5VTB9 RNU6-1096P-201ENST00000517089 102 ntBASIC2.14□□□□□ -2.07
RNF220Q5VTB9 MIR4503-201ENST00000582187 83 ntBASIC2.14□□□□□ -2.07
RNF220Q5VTB9 MIR4713-201ENST00000582691 75 ntBASIC2.14□□□□□ -2.07
RNF220Q5VTB9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.14□□□□□ -2.07
RNF220Q5VTB9 AC068647.2-201ENST00000637380 353 ntBASIC2.14□□□□□ -2.07
RNF220Q5VTB9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.14□□□□□ -2.07
RNF220Q5VTB9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
RNF220Q5VTB9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.13□□□□□ -2.07
RNF220Q5VTB9 Y_RNA.267-201ENST00000364679 109 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 RNU6-1323P-201ENST00000384025 107 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 RNU6-360P-201ENST00000390944 104 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.13□□□□□ -2.07
RNF220Q5VTB9 AL135790.2-201ENST00000437701 267 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 SNORA59A-201ENST00000459326 152 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.13□□□□□ -2.07
RNF220Q5VTB9 RNU7-116P-201ENST00000516940 62 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 AC022254.1-201ENST00000567857 235 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 MIR3162-201ENST00000581818 82 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.13□□□□□ -2.07
RNF220Q5VTB9 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 MIR8054-201ENST00000620877 86 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
RNF220Q5VTB9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.13□□□□□ -2.07
RNF220Q5VTB9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RNF220Q5VTB9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
RNF220Q5VTB9 UBE2WP1-201ENST00000362030 340 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 RNU6-801P-201ENST00000364087 105 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 Y_RNA.452-201ENST00000384202 108 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 RNU6-440P-201ENST00000390882 105 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 RPS4XP11-201ENST00000446897 772 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 AC233266.1-201ENST00000454518 96 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 SNORD127-201ENST00000458892 86 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 AL358944.1-201ENST00000528537 144 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 MIR3149-201ENST00000584629 83 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 AC242852.1-201ENST00000612151 96 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 AC244015.1-201ENST00000622301 99 ntBASIC2.12□□□□□ -2.07
RNF220Q5VTB9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RNF220Q5VTB9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 221.3 ms