Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU7-28P-201ENST00000516759 62 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 SNORA40.17-201ENST00000517256 115 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 DPPA3P3-201ENST00000603842 430 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC104629.1-201ENST00000494226 508 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AP000676.1-201ENST00000533307 52 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 RNU4-15P-201ENST00000362613 141 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 RNU1-141P-201ENST00000364623 158 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 RNU6-25P-201ENST00000383873 107 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 RNU6-29P-201ENST00000384637 107 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 MIR516B2-201ENST00000385190 85 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 RNU2-54P-201ENST00000410299 190 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC005002.2-201ENST00000438228 269 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AP000533.3-201ENST00000447704 118 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC010486.3-201ENST00000511602 785 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AL512347.1-201ENST00000566420 503 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC091946.2-201ENST00000606105 291 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC104458.1-201ENST00000608243 463 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC023510.2-201ENST00000622162 746 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC099654.9-201ENST00000637055 678 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 RNU6-479P-201ENST00000516348 105 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 SNORA31.19-201ENST00000517079 126 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 AC068587.4-201ENST00000533893 186 ntBASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.89□□□□□ -2.55
VPS13DQ5THJ4 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 SNORD28-201ENST00000384706 75 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 MIR452-201ENST00000385020 85 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 MIR136-201ENST00000385207 82 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 MIR6854-201ENST00000614935 69 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 AC010332.2-201ENST00000613083 1904 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 SNORD115-27-201ENST00000364430 82 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 RNU6-167P-201ENST00000384292 106 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 MTND1P26-201ENST00000440488 538 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 AC007969.2-201ENST00000441891 191 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 RNU2-11P-201ENST00000459191 187 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 RNU6-58P-201ENST00000517143 103 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 MIR4264-201ENST00000583520 66 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 RNU6-226P-201ENST00000363778 107 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 RNU6-166P-201ENST00000384371 107 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 MIR527-201ENST00000385244 85 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 AL358944.1-201ENST00000528537 144 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 AL354950.2-201ENST00000617939 290 ntBASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.9□□□□□ -2.55
VPS13DQ5THJ4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 RNU7-59P-201ENST00000459101 61 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 SUMO2P5-201ENST00000506790 245 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 RNU6-980P-201ENST00000516925 103 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 RNU6-86P-201ENST00000606534 107 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 AP001330.5-201ENST00000607176 411 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 AL512506.1-201ENST00000613918 449 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 AC126544.2-201ENST00000625174 749 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 AC005592.1-201ENST00000566527 1640 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 MIR544A-201ENST00000384855 91 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 AL356055.1-201ENST00000602528 446 ntBASIC-0.91□□□□□ -2.55
VPS13DQ5THJ4 SNORA1B-201ENST00000362535 133 ntBASIC-0.91□□□□□ -2.56
VPS13DQ5THJ4 SNORD45.3-201ENST00000363836 72 ntBASIC-0.91□□□□□ -2.56
VPS13DQ5THJ4 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.91□□□□□ -2.56
VPS13DQ5THJ4 MIR29B1-201ENST00000385015 81 ntBASIC-0.91□□□□□ -2.56
VPS13DQ5THJ4 RNU2-28P-201ENST00000410457 189 ntBASIC-0.91□□□□□ -2.56
VPS13DQ5THJ4 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.91□□□□□ -2.56
VPS13DQ5THJ4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.91□□□□□ -2.56
VPS13DQ5THJ4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.91□□□□□ -2.56
VPS13DQ5THJ4 AC008752.3-201ENST00000588113 712 ntBASIC-0.91□□□□□ -2.56
VPS13DQ5THJ4 MIR6818-201ENST00000621576 65 ntBASIC-0.91□□□□□ -2.56
VPS13DQ5THJ4 RNU6-386P-201ENST00000362650 107 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 RNU6-432P-201ENST00000384196 109 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 MTND3P4-201ENST00000453537 303 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 AC005520.5-201ENST00000613926 164 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 RNU6-880P-201ENST00000384526 107 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 RNA5SP86-201ENST00000390869 98 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 U8.17-201ENST00000391292 132 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 MTATP6P26-201ENST00000445926 662 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 AC013470.1-201ENST00000453438 462 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 SNORA25.17-201ENST00000517184 124 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 MIRLET7C-201ENST00000362160 84 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 RNU6-873P-201ENST00000363833 107 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 RNU6-376P-201ENST00000384731 106 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 snoU13.2-201ENST00000459201 104 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 AC090517.1-201ENST00000569307 266 ntBASIC-0.92□□□□□ -2.56
VPS13DQ5THJ4 AC245014.2-201ENST00000603689 287 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms