Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 MIR340-201ENST00000362125 95 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 RNU4-80P-201ENST00000363200 141 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 SNORD115-30-201ENST00000364117 82 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 SNORA16.1-201ENST00000364597 132 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.277-201ENST00000364754 102 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.332-201ENST00000365271 113 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 AC139712.2-201ENST00000424302 339 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 MTCO1P5-201ENST00000433573 344 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 MIR3935-201ENST00000583472 104 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 AL627230.6-201ENST00000611129 280 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 AC022202.1-201ENST00000613515 211 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 AC078938.1-201ENST00000620993 318 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 AC084768.2-201ENST00000622736 221 ntBASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.21□□□□□ -2.06
TTC39AQ5SRH9 AL359851.1-201ENST00000569460 4997 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 SNORA25.1-201ENST00000362326 128 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 RNU6-1266P-201ENST00000362794 105 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 RNU6-326P-201ENST00000365480 107 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.489-201ENST00000384410 101 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 AL031003.1-201ENST00000404229 172 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 AL512604.1-201ENST00000404812 257 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 AC123900.1-201ENST00000420390 96 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 MTCO1P44-201ENST00000441935 243 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 AC074290.1-201ENST00000448883 135 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 HMGN2P23-201ENST00000456759 269 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 RNU6-948P-201ENST00000516374 107 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 RNA5SP364-201ENST00000516938 78 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 AC027419.1-201ENST00000522976 328 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 MIR3126-201ENST00000577443 74 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 AC005357.1-201ENST00000588399 301 ntBASIC2.2□□□□□ -2.06
TTC39AQ5SRH9 CENPCP1-201ENST00000533085 2578 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 AC009487.4-201ENST00000624969 3585 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.243-201ENST00000364481 109 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 SNORA20.1-201ENST00000364790 130 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.416-201ENST00000384014 113 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 RNU6-1235P-201ENST00000384559 107 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 AL355796.1-201ENST00000406706 323 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 MIR1262-201ENST00000408276 93 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 AC016909.1-201ENST00000415916 166 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 EDDM3CP-201ENST00000415977 425 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 RNU6-498P-201ENST00000459468 107 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 RNU6-221P-201ENST00000459541 99 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 AC091959.1-201ENST00000495857 238 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 MRPS17P9-201ENST00000511924 393 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 RNU6-1023P-201ENST00000516137 106 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 MIR4643-201ENST00000577473 78 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 AC037487.3-201ENST00000606668 112 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 U2.14-201ENST00000615943 113 ntBASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.136-201ENST00000363444 102 ntBASIC2.18□□□□□ -2.06
TTC39AQ5SRH9 RNU6-1318P-201ENST00000365389 103 ntBASIC2.18□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.352-201ENST00000365439 102 ntBASIC2.18□□□□□ -2.06
TTC39AQ5SRH9 RNU6-514P-201ENST00000384208 107 ntBASIC2.18□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.539-201ENST00000384635 107 ntBASIC2.18□□□□□ -2.06
TTC39AQ5SRH9 MIR548H3-201ENST00000408771 118 ntBASIC2.18□□□□□ -2.06
TTC39AQ5SRH9 RNU6-111P-201ENST00000517179 105 ntBASIC2.18□□□□□ -2.06
TTC39AQ5SRH9 AC025647.1-201ENST00000517879 253 ntBASIC2.18□□□□□ -2.06
TTC39AQ5SRH9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.18□□□□□ -2.06
TTC39AQ5SRH9 MIR8081-201ENST00000611533 95 ntBASIC2.18□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.44-201ENST00000362676 108 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 SNORD115-3-201ENST00000363100 82 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.117-201ENST00000363294 101 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.124-201ENST00000363339 93 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 RNU6-740P-201ENST00000364734 105 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 SNORA20B-201ENST00000384220 132 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 RNU6-662P-201ENST00000384253 104 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 SNORA40.19-201ENST00000390846 128 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 RNU6-651P-201ENST00000411040 105 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 SNORD65B-201ENST00000459126 73 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 AC245060.5-201ENST00000610778 3293 ntBASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
TTC39AQ5SRH9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.20-201ENST00000362479 113 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 Y_RNA.65-201ENST00000362846 100 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 RNA5SP99-201ENST00000364020 114 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 SNORD114-6-201ENST00000364393 72 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 RNU6-338P-201ENST00000383888 105 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 SRIP3-201ENST00000413200 219 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 RNU6-191P-201ENST00000516295 94 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 MIR4419B-201ENST00000577260 68 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 MIR4287-201ENST00000579398 78 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 AL512605.2-201ENST00000592972 256 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 AC005828.6-201ENST00000606610 232 ntBASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
TTC39AQ5SRH9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.06
TTC39AQ5SRH9 AC060773.1-201ENST00000421698 310 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms