Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AC109810.1-201ENST00000534066 224 ntBASIC0.42□□□□□ -2.34
ZNF404Q494X3 AC100812.1-201ENST00000607622 580 ntBASIC0.42□□□□□ -2.34
ZNF404Q494X3 SEPT14P17-201ENST00000617978 177 ntBASIC0.42□□□□□ -2.34
ZNF404Q494X3 7SK.10-201ENST00000621414 298 ntBASIC0.42□□□□□ -2.34
ZNF404Q494X3 AC027279.3-201ENST00000625055 122 ntBASIC0.42□□□□□ -2.34
ZNF404Q494X3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
ZNF404Q494X3 RNU6-595P-201ENST00000363944 107 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 Y_RNA.414-201ENST00000384011 101 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 RNU6-483P-201ENST00000384088 108 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 MIR452-201ENST00000385020 85 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 RNU6-780P-201ENST00000391030 104 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 MIR873-201ENST00000401120 77 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 RNU6-908P-201ENST00000410160 94 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 RNU2-66P-201ENST00000410650 161 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 RPL23AP50-201ENST00000434149 455 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.41□□□□□ -2.34
ZNF404Q494X3 PCNPP5-201ENST00000452246 481 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.41□□□□□ -2.34
ZNF404Q494X3 AC010486.3-201ENST00000511602 785 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 Y_RNA.704-201ENST00000516851 102 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.41□□□□□ -2.34
ZNF404Q494X3 AC090617.3-201ENST00000573670 475 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 AC125232.2-201ENST00000592457 143 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 AC093913.1-201ENST00000614178 329 ntBASIC0.41□□□□□ -2.34
ZNF404Q494X3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
ZNF404Q494X3 Y_RNA.106-201ENST00000363189 100 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 SNORA25.3-201ENST00000363205 127 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 RNU6-596P-201ENST00000365395 98 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 RNU6-117P-201ENST00000365415 107 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 SNORD116-11-201ENST00000383882 92 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 MIR598-201ENST00000384868 97 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 ELOCP21-201ENST00000412558 336 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.4□□□□□ -2.35
ZNF404Q494X3 RPS20P10-201ENST00000451209 253 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.4□□□□□ -2.35
ZNF404Q494X3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.4□□□□□ -2.35
ZNF404Q494X3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.4□□□□□ -2.35
ZNF404Q494X3 AC019235.1-201ENST00000503847 207 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 MTND4LP26-201ENST00000518144 282 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 AC023442.1-201ENST00000531247 422 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 NBR2-204ENST00000587322 63 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 AC009229.3-201ENST00000608056 282 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 MTND5P16-201ENST00000460269 1703 ntBASIC0.4□□□□□ -2.35
ZNF404Q494X3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.4□□□□□ -2.35
ZNF404Q494X3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
ZNF404Q494X3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 SNORD68-201ENST00000363214 84 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 RNU6-1297P-201ENST00000384415 104 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 RNU6-136P-201ENST00000384663 107 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 MIR489-201ENST00000384923 84 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 MIR936-201ENST00000401264 98 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.39□□□□□ -2.35
ZNF404Q494X3 AC067940.1-201ENST00000458411 300 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 AC114811.1-201ENST00000507207 168 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 AP003716.2-201ENST00000528260 108 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.39□□□□□ -2.35
ZNF404Q494X3 AC018659.1-201ENST00000551083 169 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 U6.115-201ENST00000636045 103 ntBASIC0.39□□□□□ -2.35
ZNF404Q494X3 RNU6-451P-201ENST00000362921 107 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 MIR520C-201ENST00000385005 87 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 MIR329-1-201ENST00000385028 80 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 MIR1185-1-201ENST00000408598 86 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.38□□□□□ -2.35
ZNF404Q494X3 AC092423.1-201ENST00000430165 186 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.38□□□□□ -2.35
ZNF404Q494X3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.38□□□□□ -2.35
ZNF404Q494X3 RNU6-496P-201ENST00000516145 99 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 MTND3P12-201ENST00000559068 328 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 MIR4711-201ENST00000578274 70 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 Z99129.1-201ENST00000612510 255 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 AL357075.2-201ENST00000614906 189 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 AC104260.1-201ENST00000616660 539 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
ZNF404Q494X3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
ZNF404Q494X3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
ZNF404Q494X3 RNY3P3-201ENST00000363816 102 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 MIR516B2-201ENST00000385190 85 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 RNU6-332P-201ENST00000391193 108 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 MIR1298-201ENST00000408783 112 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 MTCYBP10-201ENST00000424905 650 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 EIF1P2-201ENST00000428233 350 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 MTND1P26-201ENST00000440488 538 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 AC074133.1-201ENST00000515696 183 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 RNU7-41P-201ENST00000515917 61 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 RNU6-63P-201ENST00000516690 95 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 MIR3942-201ENST00000585264 109 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 RNU6-94P-201ENST00000607728 107 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 AL136317.1-201ENST00000612653 226 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
ZNF404Q494X3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
ZNF404Q494X3 MIR410-201ENST00000362222 80 ntBASIC0.36□□□□□ -2.35
ZNF404Q494X3 RNU6-1059P-201ENST00000363752 98 ntBASIC0.36□□□□□ -2.35
ZNF404Q494X3 SNORD18A-201ENST00000363753 72 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms