Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 AL365434.2-201ENST00000607979 234 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 AL078604.3-201ENST00000615580 211 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 MIR1302-1-201ENST00000637932 143 ntBASIC1.31□□□□□ -2.2
SHROOM1Q2M3G4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SHROOM1Q2M3G4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SHROOM1Q2M3G4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SHROOM1Q2M3G4 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
SHROOM1Q2M3G4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.3□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-470P-201ENST00000515954 104 ntBASIC1.3□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-507P-201ENST00000516045 100 ntBASIC1.3□□□□□ -2.2
SHROOM1Q2M3G4 FAM106DP-201ENST00000586416 501 ntBASIC1.3□□□□□ -2.2
SHROOM1Q2M3G4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.3□□□□□ -2.2
SHROOM1Q2M3G4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.259-201ENST00000364619 101 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.314-201ENST00000365114 102 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 MIR625-201ENST00000385047 85 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 MIR513A1-201ENST00000385138 129 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 MRPL42P3-201ENST00000401492 326 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.592-201ENST00000410274 109 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.605-201ENST00000410577 105 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 AC091951.2-201ENST00000500762 203 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-277P-201ENST00000516272 106 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 RNU7-172P-201ENST00000517125 64 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 AC015688.6-201ENST00000577737 104 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 AC084781.2-201ENST00000615568 161 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 MIR8065-201ENST00000620577 100 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 MIR3674-201ENST00000636576 68 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 AC018630.2-201ENST00000534866 2403 ntBASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SHROOM1Q2M3G4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 MIR373-201ENST00000362273 69 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.112-201ENST00000363250 102 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-961P-201ENST00000363893 105 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-708P-201ENST00000384217 107 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-1297P-201ENST00000384415 104 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 SNORD116-29-201ENST00000384516 83 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 Y_RNA.577-201ENST00000384794 101 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 SNORA12.1-201ENST00000390873 148 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AC018865.2-201ENST00000423631 129 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 SNX2P2-201ENST00000424553 323 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 MTND4P28-201ENST00000426217 387 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 STAG3L5P-204ENST00000443759 179 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 PGBD4P5-201ENST00000445958 426 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 RPS4XP11-201ENST00000446897 772 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AC097462.1-201ENST00000514125 324 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 RNA5SP20-201ENST00000515976 84 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 RNU6-63P-201ENST00000516690 95 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 CYCSP23-201ENST00000519781 313 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AC023442.1-201ENST00000531247 422 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AC055872.1-201ENST00000570978 278 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 MIR4295-201ENST00000585286 85 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 UBE2V2P2-201ENST00000587677 504 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AL078603.1-201ENST00000603824 313 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AL050343.2-201ENST00000607338 280 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AC025253.1-201ENST00000613623 543 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AC040896.1-201ENST00000613819 479 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AC011476.5-201ENST00000615594 130 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 AC106754.2-201ENST00000623006 233 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 U6.115-201ENST00000636045 103 ntBASIC1.28□□□□□ -2.2
SHROOM1Q2M3G4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 RN7SKP200-201ENST00000410564 320 ntBASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 AC091021.1-201ENST00000468051 388 ntBASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 AC074133.1-201ENST00000515696 183 ntBASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 RNU6-699P-201ENST00000517081 110 ntBASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 AL355375.2-201ENST00000574825 175 ntBASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 SNORD114-21-201ENST00000606412 72 ntBASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 AC004467.1-201ENST00000615678 330 ntBASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 MIR6079-201ENST00000635807 62 ntBASIC1.27□□□□□ -2.21
SHROOM1Q2M3G4 SNORA27.1-201ENST00000362604 124 ntBASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 Y_RNA.356-201ENST00000365475 113 ntBASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 Y_RNA.387-201ENST00000383918 102 ntBASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 RNU6-376P-201ENST00000384731 106 ntBASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 MIR4778-201ENST00000577635 80 ntBASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 AL390123.1-201ENST00000603216 237 ntBASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 AL132765.2-201ENST00000610812 351 ntBASIC1.26□□□□□ -2.21
SHROOM1Q2M3G4 Y_RNA.384-201ENST00000383909 102 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 MIR222-201ENST00000384992 110 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 AC233266.1-201ENST00000454518 96 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 RNA5SP436-201ENST00000516020 115 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 RNU6-875P-201ENST00000516488 106 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 Y_RNA.718-201ENST00000517110 102 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 HSPE1P19-201ENST00000603327 295 ntBASIC1.25□□□□□ -2.21
SHROOM1Q2M3G4 AC242852.1-201ENST00000612151 96 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms