Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 AC244015.1-201ENST00000622301 99 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
RAB40BQ12829 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.98□□□□□ -2.25
RAB40BQ12829 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
RAB40BQ12829 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
RAB40BQ12829 RNU6-117P-201ENST00000365415 107 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 Y_RNA.577-201ENST00000384794 101 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 MIR520G-201ENST00000385064 90 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 MIR653-201ENST00000385279 96 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 SNORA69.1-201ENST00000390904 137 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 AL451046.2-201ENST00000403074 277 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 MTND4P28-201ENST00000426217 387 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 MTND1P2-201ENST00000430604 821 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.98□□□□□ -2.25
RAB40BQ12829 AC093850.1-201ENST00000454121 251 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.98□□□□□ -2.25
RAB40BQ12829 RNU6-408P-201ENST00000515910 100 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 RNU6-322P-201ENST00000516010 103 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 RNU7-12P-201ENST00000516030 62 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 RNU6-120P-201ENST00000516077 103 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 RNU6-1096P-201ENST00000517089 102 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 AC023442.1-201ENST00000531247 422 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 AC090049.2-201ENST00000550377 109 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 MIR6078-201ENST00000611069 100 ntBASIC0.98□□□□□ -2.25
RAB40BQ12829 Y_RNA.243-201ENST00000364481 109 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 Y_RNA.327-201ENST00000365201 102 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 RNU6-310P-201ENST00000384655 107 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 RNU6-136P-201ENST00000384663 107 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 SNORD41-201ENST00000386967 70 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
RAB40BQ12829 SNORA75.6-201ENST00000391318 127 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 RNU6-1156P-201ENST00000410365 100 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 Y_RNA.646-201ENST00000410980 101 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 RNU5A-5P-201ENST00000411054 116 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.97□□□□□ -2.25
RAB40BQ12829 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.97□□□□□ -2.25
RAB40BQ12829 HSPE1P13-201ENST00000451143 297 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.97□□□□□ -2.25
RAB40BQ12829 AL049830.1-201ENST00000468034 425 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 AC022493.2-201ENST00000506122 481 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 TRMT112P2-201ENST00000512910 132 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 SNORA31.2-201ENST00000516019 134 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 RNU6-947P-201ENST00000516264 106 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 RNU6-917P-201ENST00000516294 104 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 RNU6-63P-201ENST00000516690 95 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 RNA5SP404-201ENST00000517118 132 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 SNORA70.22-201ENST00000517160 124 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.97□□□□□ -2.25
RAB40BQ12829 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.97□□□□□ -2.25
RAB40BQ12829 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.97□□□□□ -2.25
RAB40BQ12829 AC027335.2-201ENST00000624030 375 ntBASIC0.97□□□□□ -2.25
RAB40BQ12829 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
RAB40BQ12829 RNY1P10-201ENST00000363268 113 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 RNU6-1188P-201ENST00000363795 107 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 SNORD81.2-201ENST00000365153 76 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 RNU6-926P-201ENST00000384075 107 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 Y_RNA.592-201ENST00000410274 109 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 SNORA31.4-201ENST00000516049 129 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 MIR5690-201ENST00000583739 73 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 MIR4295-201ENST00000585286 85 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
RAB40BQ12829 AC004467.1-201ENST00000615678 330 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 AC022306.2-201ENST00000617563 647 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 AC087588.2-201ENST00000617667 426 ntBASIC0.96□□□□□ -2.26
RAB40BQ12829 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.96□□□□□ -2.26
RAB40BQ12829 MIR337-201ENST00000362281 93 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 SNORD114-7-201ENST00000362520 77 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 SNORA2.2-201ENST00000365473 135 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 Y_RNA.505-201ENST00000384489 102 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 RNU6-321P-201ENST00000410912 106 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 RNU6-1304P-201ENST00000411374 106 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.95□□□□□ -2.26
RAB40BQ12829 AC104332.1-201ENST00000440471 797 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 ELOCP24-201ENST00000456370 334 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 AC048334.1-201ENST00000477975 159 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.95□□□□□ -2.26
RAB40BQ12829 RNU7-4P-201ENST00000516961 62 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 AL358944.1-201ENST00000528537 144 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.95□□□□□ -2.26
RAB40BQ12829 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 AL117336.2-201ENST00000602435 335 ntBASIC0.95□□□□□ -2.26
RAB40BQ12829 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RAB40BQ12829 MIRLET7C-201ENST00000362160 84 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 RNU6-961P-201ENST00000363893 105 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 SNORD115-30-201ENST00000364117 82 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 RNU6-392P-201ENST00000364926 101 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 RNU6-890P-201ENST00000384121 107 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 RNU6-910P-201ENST00000390844 107 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 MRPL35P3-201ENST00000421557 364 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.94□□□□□ -2.26
RAB40BQ12829 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 SNORA70.12-201ENST00000516084 153 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 RNU2-12P-201ENST00000517216 168 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 AC144568.1-201ENST00000520139 137 ntBASIC0.94□□□□□ -2.26
RAB40BQ12829 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms