Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RPL23AP54-201ENST00000495129 419 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 MTND1P8-201ENST00000571424 950 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 AL355375.2-201ENST00000574825 175 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 AC009248.2-201ENST00000619826 254 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 AC022306.3-201ENST00000619930 550 ntBASIC-0.35□□□□□ -2.47
HIST1H3AP68431 SNORD50.1-201ENST00000362987 71 ntBASIC-0.36□□□□□ -2.47
HIST1H3AP68431 RNU6-159P-201ENST00000391080 106 ntBASIC-0.36□□□□□ -2.47
HIST1H3AP68431 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.36□□□□□ -2.47
HIST1H3AP68431 RNU7-56P-201ENST00000458744 62 ntBASIC-0.36□□□□□ -2.47
HIST1H3AP68431 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.36□□□□□ -2.47
HIST1H3AP68431 SNORA18.6-201ENST00000516792 115 ntBASIC-0.36□□□□□ -2.47
HIST1H3AP68431 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.36□□□□□ -2.47
HIST1H3AP68431 MIR3684-201ENST00000579779 74 ntBASIC-0.36□□□□□ -2.47
HIST1H3AP68431 AC098679.4-201ENST00000624241 654 ntBASIC-0.36□□□□□ -2.47
HIST1H3AP68431 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 RNU6-117P-201ENST00000365415 107 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 RNU6V-201ENST00000384105 107 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 RNU6-205P-201ENST00000390858 107 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 AL606923.1-201ENST00000406616 190 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 SNORD100-201ENST00000408573 76 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 RNU2-54P-201ENST00000410299 190 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.37□□□□□ -2.47
HIST1H3AP68431 AL606489.2-201ENST00000433886 234 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.37□□□□□ -2.47
HIST1H3AP68431 MIR4762-201ENST00000585261 75 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.37□□□□□ -2.47
HIST1H3AP68431 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
HIST1H3AP68431 MIR377-201ENST00000362145 69 ntBASIC-0.38□□□□□ -2.47
HIST1H3AP68431 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.38□□□□□ -2.47
HIST1H3AP68431 SNORD45.3-201ENST00000363836 72 ntBASIC-0.38□□□□□ -2.47
HIST1H3AP68431 RNA5SP128-201ENST00000365305 116 ntBASIC-0.38□□□□□ -2.47
HIST1H3AP68431 MTCO2P11-201ENST00000431069 680 ntBASIC-0.38□□□□□ -2.47
HIST1H3AP68431 AC079354.2-201ENST00000453523 154 ntBASIC-0.38□□□□□ -2.47
HIST1H3AP68431 RNA5SP480-201ENST00000516840 109 ntBASIC-0.38□□□□□ -2.47
HIST1H3AP68431 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.38□□□□□ -2.47
HIST1H3AP68431 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.38□□□□□ -2.47
HIST1H3AP68431 AC020891.4-201ENST00000605745 93 ntBASIC-0.38□□□□□ -2.47
HIST1H3AP68431 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 RNU6-580P-201ENST00000365159 107 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 RNU6-214P-201ENST00000384130 107 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 RNY3P9-201ENST00000384727 106 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 SNORD28B-201ENST00000390993 75 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 AC073464.1-201ENST00000429823 534 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 MTCO2P16-201ENST00000436962 677 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 AL353572.1-201ENST00000442490 417 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 TPTE2P5-203ENST00000458118 728 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 RNU7-129P-201ENST00000516128 62 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 SNORD45.4-201ENST00000516629 73 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 RNU6-63P-201ENST00000516690 95 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 MIR4305-201ENST00000583252 102 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 PIGPP4-201ENST00000584447 307 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 MIR5692C1-201ENST00000585309 91 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 AC092747.3-201ENST00000603769 301 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 AP000753.3-201ENST00000604083 169 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 AL121757.2-201ENST00000611223 313 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 AC004223.4-201ENST00000612426 332 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 AC103705.1-201ENST00000619013 241 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 AL109933.3-201ENST00000619095 188 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 AC010608.3-201ENST00000625048 527 ntBASIC-0.39□□□□□ -2.47
HIST1H3AP68431 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 RNU6-756P-201ENST00000383997 107 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 MT-TN-201ENST00000387400 73 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 RNU6-127P-201ENST00000390897 107 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 MIR938-201ENST00000401216 83 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 MLLT10P1-201ENST00000418346 262 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 Z99497.1-201ENST00000421282 135 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.4□□□□□ -2.47
HIST1H3AP68431 AL593851.1-201ENST00000426171 157 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.4□□□□□ -2.47
HIST1H3AP68431 RNU7-63P-201ENST00000459054 62 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 MIR548AR-201ENST00000582191 57 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 AC011458.1-201ENST00000604034 617 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.4□□□□□ -2.47
HIST1H3AP68431 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 MIR570-201ENST00000384917 97 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 MIR873-201ENST00000401120 77 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 MTCO2P33-201ENST00000402100 465 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 RNA5SP127-201ENST00000411051 133 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.41□□□□□ -2.48
HIST1H3AP68431 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.41□□□□□ -2.48
HIST1H3AP68431 RNU6-311P-201ENST00000516224 102 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 RNA5SP268-201ENST00000516828 124 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.41□□□□□ -2.48
HIST1H3AP68431 AC090897.1-201ENST00000580909 226 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 MIR7111-201ENST00000619751 72 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 MIR6755-201ENST00000619993 66 ntBASIC-0.41□□□□□ -2.48
HIST1H3AP68431 RNU6-996P-201ENST00000365438 107 ntBASIC-0.42□□□□□ -2.48
HIST1H3AP68431 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.42□□□□□ -2.48
HIST1H3AP68431 AC073415.1-201ENST00000449240 153 ntBASIC-0.42□□□□□ -2.48
HIST1H3AP68431 SUMO1P2-201ENST00000452524 304 ntBASIC-0.42□□□□□ -2.48
HIST1H3AP68431 RPL30P10-201ENST00000488148 337 ntBASIC-0.42□□□□□ -2.48
HIST1H3AP68431 SNORA19.2-201ENST00000516013 114 ntBASIC-0.42□□□□□ -2.48
HIST1H3AP68431 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms