Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AL353572.1-201ENST00000442490 417 ntBASIC-0.15□□□□□ -2.43
SKP1P63208 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.15□□□□□ -2.43
SKP1P63208 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.15□□□□□ -2.43
SKP1P63208 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
SKP1P63208 MIR3913-1-201ENST00000577744 102 ntBASIC-0.15□□□□□ -2.43
SKP1P63208 AL136370.1-201ENST00000608166 691 ntBASIC-0.15□□□□□ -2.43
SKP1P63208 AC104260.1-201ENST00000616660 539 ntBASIC-0.15□□□□□ -2.43
SKP1P63208 AC072046.2-201ENST00000618366 268 ntBASIC-0.15□□□□□ -2.43
SKP1P63208 AC127459.3-201ENST00000624328 466 ntBASIC-0.15□□□□□ -2.43
SKP1P63208 MIR4251-201ENST00000635819 61 ntBASIC-0.15□□□□□ -2.43
SKP1P63208 FGF7P2-201ENST00000332473 296 ntBASIC-0.16□□□□□ -2.44
SKP1P63208 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.16□□□□□ -2.44
SKP1P63208 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.16□□□□□ -2.44
SKP1P63208 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.16□□□□□ -2.44
SKP1P63208 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.16□□□□□ -2.44
SKP1P63208 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.16□□□□□ -2.44
SKP1P63208 SNORD123-201ENST00000459473 70 ntBASIC-0.16□□□□□ -2.44
SKP1P63208 RNU6-977P-201ENST00000516411 103 ntBASIC-0.16□□□□□ -2.44
SKP1P63208 RNU6-107P-201ENST00000516643 102 ntBASIC-0.16□□□□□ -2.44
SKP1P63208 AC012433.1-201ENST00000588916 398 ntBASIC-0.16□□□□□ -2.44
SKP1P63208 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
SKP1P63208 AL139396.1-201ENST00000421137 167 ntBASIC-0.17□□□□□ -2.44
SKP1P63208 AL353997.1-201ENST00000432936 108 ntBASIC-0.17□□□□□ -2.44
SKP1P63208 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.17□□□□□ -2.44
SKP1P63208 AC112693.2-201ENST00000556538 232 ntBASIC-0.17□□□□□ -2.44
SKP1P63208 UBL5P4-201ENST00000562584 236 ntBASIC-0.17□□□□□ -2.44
SKP1P63208 MIR548AO-201ENST00000579992 96 ntBASIC-0.17□□□□□ -2.44
SKP1P63208 AF250324.2-201ENST00000608299 610 ntBASIC-0.17□□□□□ -2.44
SKP1P63208 AC022306.3-201ENST00000619930 550 ntBASIC-0.17□□□□□ -2.44
SKP1P63208 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.17□□□□□ -2.44
SKP1P63208 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.17□□□□□ -2.44
SKP1P63208 MIR377-201ENST00000362145 69 ntBASIC-0.18□□□□□ -2.44
SKP1P63208 SNORD118-201ENST00000363593 134 ntBASIC-0.18□□□□□ -2.44
SKP1P63208 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.18□□□□□ -2.44
SKP1P63208 MIR7-2-201ENST00000384970 110 ntBASIC-0.18□□□□□ -2.44
SKP1P63208 AL590632.1-201ENST00000424289 371 ntBASIC-0.18□□□□□ -2.44
SKP1P63208 MTCO1P20-201ENST00000425366 358 ntBASIC-0.18□□□□□ -2.44
SKP1P63208 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.18□□□□□ -2.44
SKP1P63208 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.18□□□□□ -2.44
SKP1P63208 MIR4290-201ENST00000583807 95 ntBASIC-0.18□□□□□ -2.44
SKP1P63208 AL121757.2-201ENST00000611223 313 ntBASIC-0.18□□□□□ -2.44
SKP1P63208 AL109933.3-201ENST00000619095 188 ntBASIC-0.18□□□□□ -2.44
SKP1P63208 MIR873-201ENST00000401120 77 ntBASIC-0.19□□□□□ -2.44
SKP1P63208 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.19□□□□□ -2.44
SKP1P63208 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.19□□□□□ -2.44
SKP1P63208 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.19□□□□□ -2.44
SKP1P63208 AC104408.1-201ENST00000605241 170 ntBASIC-0.19□□□□□ -2.44
SKP1P63208 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.19□□□□□ -2.44
SKP1P63208 SNORD114-5-201ENST00000362928 70 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 RNU6-580P-201ENST00000365159 107 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 RNU6-396P-201ENST00000365369 105 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 MT-TN-201ENST00000387400 73 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.2□□□□□ -2.44
SKP1P63208 SUMO1P2-201ENST00000452524 304 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 AC046134.1-201ENST00000514454 666 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 RNA5SP94-201ENST00000516917 108 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 AC134698.4-201ENST00000523451 826 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.2□□□□□ -2.44
SKP1P63208 AC109347.2-201ENST00000610220 349 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 AL591926.4-201ENST00000616895 298 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 AL354950.2-201ENST00000617939 290 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 AC079248.2-201ENST00000623779 326 ntBASIC-0.2□□□□□ -2.44
SKP1P63208 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.2□□□□□ -2.44
SKP1P63208 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.21□□□□□ -2.44
SKP1P63208 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 SNORD113-7-201ENST00000363762 77 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 RNU6-925P-201ENST00000384629 104 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 RPL30P16-201ENST00000419341 429 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 AC015818.7-201ENST00000428754 109 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 SEPT7P4-201ENST00000437076 306 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 MTND1P26-201ENST00000440488 538 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 AC087499.7-201ENST00000441958 109 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 snoU13.21-201ENST00000459368 105 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 HMGN1P10-201ENST00000474557 553 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 RPL30P10-201ENST00000488148 337 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 MTCO2P30-201ENST00000503662 364 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 AL355375.2-201ENST00000574825 175 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 AC073534.2-201ENST00000620377 381 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.21□□□□□ -2.44
SKP1P63208 SNORD114-7-201ENST00000362520 77 ntBASIC-0.22□□□□□ -2.44
SKP1P63208 RNU4-21P-201ENST00000362802 126 ntBASIC-0.22□□□□□ -2.44
SKP1P63208 RNU6-553P-201ENST00000364047 96 ntBASIC-0.22□□□□□ -2.44
SKP1P63208 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.22□□□□□ -2.44
SKP1P63208 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.22□□□□□ -2.44
SKP1P63208 RNU6-700P-201ENST00000391043 107 ntBASIC-0.22□□□□□ -2.44
SKP1P63208 HMGN2P32-201ENST00000444648 269 ntBASIC-0.22□□□□□ -2.44
SKP1P63208 AF246928.1-201ENST00000623768 87 ntBASIC-0.22□□□□□ -2.44
SKP1P63208 AL390729.2-201ENST00000416137 156 ntBASIC-0.23□□□□□ -2.45
SKP1P63208 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.23□□□□□ -2.45
SKP1P63208 RNU6-232P-201ENST00000517144 64 ntBASIC-0.23□□□□□ -2.45
SKP1P63208 AC026371.1-201ENST00000551867 419 ntBASIC-0.23□□□□□ -2.45
SKP1P63208 AL118558.2-201ENST00000556294 238 ntBASIC-0.23□□□□□ -2.45
SKP1P63208 RPL23AP91-201ENST00000569211 455 ntBASIC-0.23□□□□□ -2.45
SKP1P63208 MIR4804-201ENST00000581683 73 ntBASIC-0.23□□□□□ -2.45
SKP1P63208 MIR4305-201ENST00000583252 102 ntBASIC-0.23□□□□□ -2.45
SKP1P63208 AC005828.6-201ENST00000606610 232 ntBASIC-0.23□□□□□ -2.45
SKP1P63208 AC090517.2-201ENST00000614966 680 ntBASIC-0.23□□□□□ -2.45
SKP1P63208 RNU6-934P-201ENST00000365154 107 ntBASIC-0.24□□□□□ -2.45
SKP1P63208 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms