Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
ACTBP60709 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
ACTBP60709 RNU6-1322P-201ENST00000364309 107 ntBASIC0.2□□□□□ -2.38
ACTBP60709 Y_RNA.231-201ENST00000364358 102 ntBASIC0.2□□□□□ -2.38
ACTBP60709 RNU6-407P-201ENST00000365280 104 ntBASIC0.2□□□□□ -2.38
ACTBP60709 AC117470.1-201ENST00000381974 330 ntBASIC0.2□□□□□ -2.38
ACTBP60709 RNU6-281P-201ENST00000384212 103 ntBASIC0.2□□□□□ -2.38
ACTBP60709 MIR1298-201ENST00000408783 112 ntBASIC0.2□□□□□ -2.38
ACTBP60709 MIR1302-7-201ENST00000408841 72 ntBASIC0.2□□□□□ -2.38
ACTBP60709 RNA5SP222-201ENST00000411039 105 ntBASIC0.2□□□□□ -2.38
ACTBP60709 PCNPP5-201ENST00000452246 481 ntBASIC0.2□□□□□ -2.38
ACTBP60709 MIR4514-201ENST00000581410 57 ntBASIC0.2□□□□□ -2.38
ACTBP60709 POLR3GP2-201ENST00000588366 668 ntBASIC0.2□□□□□ -2.38
ACTBP60709 MIR8087-201ENST00000612745 78 ntBASIC0.2□□□□□ -2.38
ACTBP60709 AC091925.1-201ENST00000623204 462 ntBASIC0.2□□□□□ -2.38
ACTBP60709 MIR410-201ENST00000362222 80 ntBASIC0.19□□□□□ -2.38
ACTBP60709 MIR520C-201ENST00000385005 87 ntBASIC0.19□□□□□ -2.38
ACTBP60709 RNU2-70P-201ENST00000410718 179 ntBASIC0.19□□□□□ -2.38
ACTBP60709 RNU4-55P-201ENST00000410731 137 ntBASIC0.19□□□□□ -2.38
ACTBP60709 ELOCP21-201ENST00000412558 336 ntBASIC0.19□□□□□ -2.38
ACTBP60709 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.19□□□□□ -2.38
ACTBP60709 PIGPP3-201ENST00000425307 415 ntBASIC0.19□□□□□ -2.38
ACTBP60709 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.19□□□□□ -2.38
ACTBP60709 RPS3AP17-201ENST00000472594 777 ntBASIC0.19□□□□□ -2.38
ACTBP60709 AC083904.1-201ENST00000487828 231 ntBASIC0.19□□□□□ -2.38
ACTBP60709 AC114811.1-201ENST00000507207 168 ntBASIC0.19□□□□□ -2.38
ACTBP60709 RNU6-1114P-201ENST00000516022 107 ntBASIC0.19□□□□□ -2.38
ACTBP60709 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.19□□□□□ -2.38
ACTBP60709 MIR4764-201ENST00000580680 88 ntBASIC0.19□□□□□ -2.38
ACTBP60709 RNU6-89P-201ENST00000606519 100 ntBASIC0.19□□□□□ -2.38
ACTBP60709 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
ACTBP60709 AC097520.1-201ENST00000624435 385 ntBASIC0.19□□□□□ -2.38
ACTBP60709 AC099654.12-201ENST00000639868 649 ntBASIC0.19□□□□□ -2.38
ACTBP60709 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.18□□□□□ -2.38
ACTBP60709 MIR330-201ENST00000362196 94 ntBASIC0.18□□□□□ -2.38
ACTBP60709 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
ACTBP60709 SNORD113.3-201ENST00000364630 78 ntBASIC0.18□□□□□ -2.38
ACTBP60709 Y_RNA.296-201ENST00000364930 108 ntBASIC0.18□□□□□ -2.38
ACTBP60709 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
ACTBP60709 SNORA36.2-201ENST00000384004 127 ntBASIC0.18□□□□□ -2.38
ACTBP60709 MIR517A-201ENST00000385001 87 ntBASIC0.18□□□□□ -2.38
ACTBP60709 MIR873-201ENST00000401120 77 ntBASIC0.18□□□□□ -2.38
ACTBP60709 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.18□□□□□ -2.38
ACTBP60709 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.18□□□□□ -2.38
ACTBP60709 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.18□□□□□ -2.38
ACTBP60709 RNU7-43P-201ENST00000516554 64 ntBASIC0.18□□□□□ -2.38
ACTBP60709 RNU6-107P-201ENST00000516643 102 ntBASIC0.18□□□□□ -2.38
ACTBP60709 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.18□□□□□ -2.38
ACTBP60709 AC127459.3-201ENST00000624328 466 ntBASIC0.18□□□□□ -2.38
ACTBP60709 SNORD114-7-201ENST00000362520 77 ntBASIC0.17□□□□□ -2.38
ACTBP60709 Y_RNA.135-201ENST00000363439 95 ntBASIC0.17□□□□□ -2.38
ACTBP60709 SNORD14.1-201ENST00000365609 90 ntBASIC0.17□□□□□ -2.38
ACTBP60709 MIR15B-201ENST00000385045 98 ntBASIC0.17□□□□□ -2.38
ACTBP60709 RNU6-994P-201ENST00000410507 111 ntBASIC0.17□□□□□ -2.38
ACTBP60709 AL358176.2-201ENST00000425769 204 ntBASIC0.17□□□□□ -2.38
ACTBP60709 ACA59.1-201ENST00000515966 143 ntBASIC0.17□□□□□ -2.38
ACTBP60709 AL138726.1-201ENST00000614873 333 ntBASIC0.17□□□□□ -2.38
ACTBP60709 U6.115-201ENST00000636045 103 ntBASIC0.17□□□□□ -2.38
ACTBP60709 RNU6-369P-201ENST00000362515 102 ntBASIC0.16□□□□□ -2.38
ACTBP60709 MIR573-201ENST00000384964 99 ntBASIC0.16□□□□□ -2.38
ACTBP60709 MIR136-201ENST00000385207 82 ntBASIC0.16□□□□□ -2.38
ACTBP60709 RNU6-1304P-201ENST00000411374 106 ntBASIC0.16□□□□□ -2.38
ACTBP60709 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.16□□□□□ -2.38
ACTBP60709 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.16□□□□□ -2.38
ACTBP60709 AL590632.1-201ENST00000424289 371 ntBASIC0.16□□□□□ -2.38
ACTBP60709 AC092447.3-201ENST00000426027 686 ntBASIC0.16□□□□□ -2.38
ACTBP60709 MTND3P23-201ENST00000431980 347 ntBASIC0.16□□□□□ -2.38
ACTBP60709 ERLEC1P1-201ENST00000433806 578 ntBASIC0.16□□□□□ -2.38
ACTBP60709 MTND1P4-201ENST00000435196 415 ntBASIC0.16□□□□□ -2.38
ACTBP60709 Y_RNA.665-201ENST00000516177 98 ntBASIC0.16□□□□□ -2.38
ACTBP60709 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.16□□□□□ -2.38
ACTBP60709 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.16□□□□□ -2.38
ACTBP60709 AC104695.3-201ENST00000604052 296 ntBASIC0.16□□□□□ -2.38
ACTBP60709 RNA5SP325-201ENST00000363756 130 ntBASIC0.15□□□□□ -2.39
ACTBP60709 RNU6-654P-201ENST00000364373 107 ntBASIC0.15□□□□□ -2.39
ACTBP60709 RNU4-67P-201ENST00000364569 141 ntBASIC0.15□□□□□ -2.39
ACTBP60709 Y_RNA.361-201ENST00000365515 120 ntBASIC0.15□□□□□ -2.39
ACTBP60709 Y_RNA.481-201ENST00000384373 102 ntBASIC0.15□□□□□ -2.39
ACTBP60709 Y_RNA.582-201ENST00000391023 95 ntBASIC0.15□□□□□ -2.39
ACTBP60709 RNU6-613P-201ENST00000410412 108 ntBASIC0.15□□□□□ -2.39
ACTBP60709 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.15□□□□□ -2.39
ACTBP60709 SUMO1P2-201ENST00000452524 304 ntBASIC0.15□□□□□ -2.39
ACTBP60709 RNU7-66P-201ENST00000459469 62 ntBASIC0.15□□□□□ -2.39
ACTBP60709 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.15□□□□□ -2.39
ACTBP60709 RNU7-175P-201ENST00000515915 61 ntBASIC0.15□□□□□ -2.39
ACTBP60709 RN7SKP298-201ENST00000515950 94 ntBASIC0.15□□□□□ -2.39
ACTBP60709 Y_RNA.695-201ENST00000516715 107 ntBASIC0.15□□□□□ -2.39
ACTBP60709 RNA5SP330-201ENST00000517096 96 ntBASIC0.15□□□□□ -2.39
ACTBP60709 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.15□□□□□ -2.39
ACTBP60709 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.15□□□□□ -2.39
ACTBP60709 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.15□□□□□ -2.39
ACTBP60709 AC023932.2-201ENST00000603176 175 ntBASIC0.15□□□□□ -2.39
ACTBP60709 AF250324.2-201ENST00000608299 610 ntBASIC0.15□□□□□ -2.39
ACTBP60709 AL591926.4-201ENST00000616895 298 ntBASIC0.15□□□□□ -2.39
ACTBP60709 Z69908.1-201ENST00000622603 247 ntBASIC0.15□□□□□ -2.39
ACTBP60709 AC068137.3-201ENST00000639191 341 ntBASIC0.15□□□□□ -2.39
ACTBP60709 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.15□□□□□ -2.39
ACTBP60709 RNU6-222P-201ENST00000362438 107 ntBASIC0.14□□□□□ -2.39
ACTBP60709 SNORD68-201ENST00000363214 84 ntBASIC0.14□□□□□ -2.39
ACTBP60709 Y_RNA.115-201ENST00000363272 98 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms