Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-1096P-201ENST00000517089 102 ntBASIC0.89□□□□□ -2.27
PKNOX1P55347 MIR4524B-201ENST00000581569 115 ntBASIC0.89□□□□□ -2.27
PKNOX1P55347 AC005899.2-201ENST00000584353 90 ntBASIC0.89□□□□□ -2.27
PKNOX1P55347 AC104984.5-201ENST00000586878 94 ntBASIC0.89□□□□□ -2.27
PKNOX1P55347 AC068790.6-201ENST00000602558 258 ntBASIC0.89□□□□□ -2.27
PKNOX1P55347 PISRT1.1-201ENST00000616930 107 ntBASIC0.89□□□□□ -2.27
PKNOX1P55347 AL669831.3-213ENST00000636676 183 ntBASIC0.89□□□□□ -2.27
PKNOX1P55347 AC027514.1-201ENST00000588561 1603 ntBASIC0.89□□□□□ -2.27
PKNOX1P55347 RNU4-41P-201ENST00000364426 143 ntBASIC0.88□□□□□ -2.27
PKNOX1P55347 MIR526A1-201ENST00000384897 85 ntBASIC0.88□□□□□ -2.27
PKNOX1P55347 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.88□□□□□ -2.27
PKNOX1P55347 AC104332.1-201ENST00000440471 797 ntBASIC0.88□□□□□ -2.27
PKNOX1P55347 AL049830.1-201ENST00000468034 425 ntBASIC0.88□□□□□ -2.27
PKNOX1P55347 SNORD79.1-201ENST00000516069 84 ntBASIC0.88□□□□□ -2.27
PKNOX1P55347 RNU6-1116P-201ENST00000517269 99 ntBASIC0.88□□□□□ -2.27
PKNOX1P55347 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.88□□□□□ -2.27
PKNOX1P55347 AC055872.1-201ENST00000570978 278 ntBASIC0.88□□□□□ -2.27
PKNOX1P55347 AC136932.1-201ENST00000574771 208 ntBASIC0.88□□□□□ -2.27
PKNOX1P55347 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
PKNOX1P55347 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.88□□□□□ -2.27
PKNOX1P55347 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
PKNOX1P55347 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
PKNOX1P55347 SNORD115-30-201ENST00000364117 82 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 Y_RNA.279-201ENST00000364763 95 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 Y_RNA.327-201ENST00000365201 102 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 RNU6-767P-201ENST00000384132 107 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 RNU6-136P-201ENST00000384663 107 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 MIR520G-201ENST00000385064 90 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 SNORD12-201ENST00000391002 90 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 POLR2J4-204ENST00000418424 324 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 PDCL2P1-201ENST00000419302 352 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 RPL23AP50-201ENST00000434149 455 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 SUMO1P2-201ENST00000452524 304 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 AC233266.1-201ENST00000454518 96 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 RNU6-947P-201ENST00000516264 106 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 Y_RNA.691-201ENST00000516611 103 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 RNU2-12P-201ENST00000517216 168 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 AL358944.1-201ENST00000528537 144 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 AC242852.1-201ENST00000612151 96 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 AC087588.2-201ENST00000617667 426 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 AC244015.1-201ENST00000622301 99 ntBASIC0.87□□□□□ -2.27
PKNOX1P55347 SNORD114-7-201ENST00000362520 77 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 RNU6-845P-201ENST00000362578 103 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 RNU6-961P-201ENST00000363893 105 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 RNU6-53P-201ENST00000365367 106 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 AC114482.1-201ENST00000418010 247 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 MIR2053-201ENST00000459295 91 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 AL163540.1-201ENST00000485382 386 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 RPS26P48-201ENST00000491713 339 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.86□□□□□ -2.27
PKNOX1P55347 RNU6-408P-201ENST00000515910 100 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 RNU6-322P-201ENST00000516010 103 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 RNU6-307P-201ENST00000516743 106 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 MIR2355-201ENST00000517199 87 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 AC023442.1-201ENST00000531247 422 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.86□□□□□ -2.27
PKNOX1P55347 AC080078.3-201ENST00000605407 463 ntBASIC0.86□□□□□ -2.27
PKNOX1P55347 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.86□□□□□ -2.27
PKNOX1P55347 CASC19-280ENST00000642102 1351 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 RNA5SP511-201ENST00000410487 115 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 AL354751.2-201ENST00000415471 210 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.85□□□□□ -2.27
PKNOX1P55347 AC063976.4-201ENST00000421971 163 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 AC002429.1-201ENST00000437672 148 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.85□□□□□ -2.27
PKNOX1P55347 HSPE1P13-201ENST00000451143 297 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 ELOCP24-201ENST00000456370 334 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 snoU13.25-201ENST00000458945 104 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 COX6CP14-201ENST00000469580 174 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.85□□□□□ -2.27
PKNOX1P55347 AL357312.1-201ENST00000603879 298 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 AL020996.3-201ENST00000606617 222 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 AL096861.1-201ENST00000610899 123 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 AC004467.1-201ENST00000615678 330 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 AC139792.2-201ENST00000624218 587 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 AL359757.2-201ENST00000624309 274 ntBASIC0.85□□□□□ -2.27
PKNOX1P55347 Y_RNA.160-201ENST00000363677 92 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 Y_RNA.166-201ENST00000363730 102 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 RNU6-192P-201ENST00000391253 100 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 Y_RNA.592-201ENST00000410274 109 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 Y_RNA.646-201ENST00000410980 101 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 MTND4P28-201ENST00000426217 387 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 SNORD124-201ENST00000459577 104 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 RNU6-1337P-201ENST00000516525 95 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
PKNOX1P55347 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 AC016727.1-205ENST00000605437 569 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 AC004832.4-201ENST00000608952 331 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 AC098679.4-201ENST00000624241 654 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 AC091895.1-201ENST00000624494 256 ntBASIC0.84□□□□□ -2.27
PKNOX1P55347 RNU6-833P-201ENST00000363486 107 ntBASIC0.83□□□□□ -2.28
PKNOX1P55347 RNU6-1188P-201ENST00000363795 107 ntBASIC0.83□□□□□ -2.28
PKNOX1P55347 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
PKNOX1P55347 RNU6-969P-201ENST00000383900 105 ntBASIC0.83□□□□□ -2.28
PKNOX1P55347 RNU6-1310P-201ENST00000384153 107 ntBASIC0.83□□□□□ -2.28
PKNOX1P55347 RNU6-310P-201ENST00000384655 107 ntBASIC0.83□□□□□ -2.28
PKNOX1P55347 Y_RNA.577-201ENST00000384794 101 ntBASIC0.83□□□□□ -2.28
PKNOX1P55347 RNU6-370P-201ENST00000411008 104 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms