Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 Y_RNA.554-201ENST00000384672 102 ntBASIC0.67□□□□□ -2.3
CDH6P55285 MIR181A1-201ENST00000385026 110 ntBASIC0.67□□□□□ -2.3
CDH6P55285 MIR605-201ENST00000385078 83 ntBASIC0.67□□□□□ -2.3
CDH6P55285 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CDH6P55285 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CDH6P55285 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
CDH6P55285 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.67□□□□□ -2.3
CDH6P55285 FABP5P4-201ENST00000437203 171 ntBASIC0.67□□□□□ -2.3
CDH6P55285 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.67□□□□□ -2.3
CDH6P55285 SNORD5.1-201ENST00000458800 75 ntBASIC0.67□□□□□ -2.3
CDH6P55285 RNU6-1096P-201ENST00000517089 102 ntBASIC0.67□□□□□ -2.3
CDH6P55285 AC018448.1-201ENST00000552843 316 ntBASIC0.67□□□□□ -2.3
CDH6P55285 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
CDH6P55285 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
CDH6P55285 AC012557.2-201ENST00000605919 418 ntBASIC0.67□□□□□ -2.3
CDH6P55285 AC104260.1-201ENST00000616660 539 ntBASIC0.67□□□□□ -2.3
CDH6P55285 AC127459.3-201ENST00000624328 466 ntBASIC0.67□□□□□ -2.3
CDH6P55285 U6.115-201ENST00000636045 103 ntBASIC0.67□□□□□ -2.3
CDH6P55285 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.67□□□□□ -2.3
CDH6P55285 Y_RNA.9-201ENST00000362354 101 ntBASIC0.66□□□□□ -2.3
CDH6P55285 Y_RNA.89-201ENST00000363031 102 ntBASIC0.66□□□□□ -2.3
CDH6P55285 RNY4P14-201ENST00000363656 96 ntBASIC0.66□□□□□ -2.3
CDH6P55285 Y_RNA.364-201ENST00000365532 101 ntBASIC0.66□□□□□ -2.3
CDH6P55285 Y_RNA.498-201ENST00000384460 102 ntBASIC0.66□□□□□ -2.3
CDH6P55285 MIR873-201ENST00000401120 77 ntBASIC0.66□□□□□ -2.3
CDH6P55285 MIR891A-201ENST00000401237 79 ntBASIC0.66□□□□□ -2.3
CDH6P55285 RNU5A-5P-201ENST00000411054 116 ntBASIC0.66□□□□□ -2.3
CDH6P55285 AL139396.1-201ENST00000421137 167 ntBASIC0.66□□□□□ -2.3
CDH6P55285 AL353997.1-201ENST00000432936 108 ntBASIC0.66□□□□□ -2.3
CDH6P55285 Z98949.2-201ENST00000440996 144 ntBASIC0.66□□□□□ -2.3
CDH6P55285 RPEP5-201ENST00000441137 268 ntBASIC0.66□□□□□ -2.3
CDH6P55285 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.66□□□□□ -2.3
CDH6P55285 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.66□□□□□ -2.3
CDH6P55285 RNU6-63P-201ENST00000516690 95 ntBASIC0.66□□□□□ -2.3
CDH6P55285 MIR5701-3-201ENST00000578890 82 ntBASIC0.66□□□□□ -2.3
CDH6P55285 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.66□□□□□ -2.3
CDH6P55285 MIR5701-1-201ENST00000585138 82 ntBASIC0.66□□□□□ -2.3
CDH6P55285 AC005014.2-201ENST00000607795 599 ntBASIC0.66□□□□□ -2.3
CDH6P55285 AL391903.3-201ENST00000612158 163 ntBASIC0.66□□□□□ -2.3
CDH6P55285 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CDH6P55285 MIR5701-2-201ENST00000615634 82 ntBASIC0.66□□□□□ -2.3
CDH6P55285 AC015540.1-201ENST00000615828 501 ntBASIC0.66□□□□□ -2.3
CDH6P55285 MIR6788-201ENST00000618842 66 ntBASIC0.66□□□□□ -2.3
CDH6P55285 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.65□□□□□ -2.31
CDH6P55285 RNU6-874P-201ENST00000362390 105 ntBASIC0.65□□□□□ -2.31
CDH6P55285 RNU4-24P-201ENST00000364565 139 ntBASIC0.65□□□□□ -2.31
CDH6P55285 RNU4-12P-201ENST00000365233 139 ntBASIC0.65□□□□□ -2.31
CDH6P55285 RNU6-117P-201ENST00000365415 107 ntBASIC0.65□□□□□ -2.31
CDH6P55285 RNU6-1145P-201ENST00000384246 107 ntBASIC0.65□□□□□ -2.31
CDH6P55285 MIR520G-201ENST00000385064 90 ntBASIC0.65□□□□□ -2.31
CDH6P55285 RNU6-700P-201ENST00000391043 107 ntBASIC0.65□□□□□ -2.31
CDH6P55285 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.65□□□□□ -2.31
CDH6P55285 PIGPP3-201ENST00000425307 415 ntBASIC0.65□□□□□ -2.31
CDH6P55285 snoU13.25-201ENST00000458945 104 ntBASIC0.65□□□□□ -2.31
CDH6P55285 U8.22-201ENST00000459141 133 ntBASIC0.65□□□□□ -2.31
CDH6P55285 RNU6-625P-201ENST00000459412 107 ntBASIC0.65□□□□□ -2.31
CDH6P55285 AC022868.1-201ENST00000517767 391 ntBASIC0.65□□□□□ -2.31
CDH6P55285 AC004812.1-201ENST00000540773 146 ntBASIC0.65□□□□□ -2.31
CDH6P55285 AC093913.1-201ENST00000614178 329 ntBASIC0.65□□□□□ -2.31
CDH6P55285 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.65□□□□□ -2.31
CDH6P55285 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.65□□□□□ -2.31
CDH6P55285 Y_RNA.157-201ENST00000363638 102 ntBASIC0.64□□□□□ -2.31
CDH6P55285 RNU6-454P-201ENST00000364292 107 ntBASIC0.64□□□□□ -2.31
CDH6P55285 Y_RNA.295-201ENST00000364918 102 ntBASIC0.64□□□□□ -2.31
CDH6P55285 RNU6-163P-201ENST00000384396 106 ntBASIC0.64□□□□□ -2.31
CDH6P55285 Y_RNA.557-201ENST00000384680 107 ntBASIC0.64□□□□□ -2.31
CDH6P55285 MIR548J-201ENST00000408833 112 ntBASIC0.64□□□□□ -2.31
CDH6P55285 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.64□□□□□ -2.31
CDH6P55285 AC074133.1-201ENST00000515696 183 ntBASIC0.64□□□□□ -2.31
CDH6P55285 RNU4-49P-201ENST00000516080 140 ntBASIC0.64□□□□□ -2.31
CDH6P55285 Y_RNA.682-201ENST00000516457 100 ntBASIC0.64□□□□□ -2.31
CDH6P55285 AL358944.1-201ENST00000528537 144 ntBASIC0.64□□□□□ -2.31
CDH6P55285 MIR3192-201ENST00000584920 77 ntBASIC0.64□□□□□ -2.31
CDH6P55285 AC120024.3-201ENST00000603167 156 ntBASIC0.64□□□□□ -2.31
CDH6P55285 AC018462.2-201ENST00000605375 395 ntBASIC0.64□□□□□ -2.31
CDH6P55285 AC104465.1-201ENST00000611365 139 ntBASIC0.64□□□□□ -2.31
CDH6P55285 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.64□□□□□ -2.31
CDH6P55285 AL008636.1-201ENST00000625038 1018 ntBASIC0.64□□□□□ -2.31
CDH6P55285 MIR3674-201ENST00000636576 68 ntBASIC0.64□□□□□ -2.31
CDH6P55285 Y_RNA.2-201ENST00000362330 96 ntBASIC0.63□□□□□ -2.31
CDH6P55285 SNORD68-201ENST00000363214 84 ntBASIC0.63□□□□□ -2.31
CDH6P55285 RNU6-833P-201ENST00000363486 107 ntBASIC0.63□□□□□ -2.31
CDH6P55285 Y_RNA.301-201ENST00000364990 103 ntBASIC0.63□□□□□ -2.31
CDH6P55285 Y_RNA.330-201ENST00000365230 109 ntBASIC0.63□□□□□ -2.31
CDH6P55285 Y_RNA.336-201ENST00000365307 109 ntBASIC0.63□□□□□ -2.31
CDH6P55285 Y_RNA.450-201ENST00000384198 113 ntBASIC0.63□□□□□ -2.31
CDH6P55285 RNU6-110P-201ENST00000384508 104 ntBASIC0.63□□□□□ -2.31
CDH6P55285 RPS26P5-201ENST00000418544 335 ntBASIC0.63□□□□□ -2.31
CDH6P55285 MTND5P5-201ENST00000503764 376 ntBASIC0.63□□□□□ -2.31
CDH6P55285 CYCTP-201ENST00000504253 315 ntBASIC0.63□□□□□ -2.31
CDH6P55285 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.63□□□□□ -2.31
CDH6P55285 AC023442.1-201ENST00000531247 422 ntBASIC0.63□□□□□ -2.31
CDH6P55285 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.63□□□□□ -2.31
CDH6P55285 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.63□□□□□ -2.31
CDH6P55285 MIR151B-201ENST00000584249 96 ntBASIC0.63□□□□□ -2.31
CDH6P55285 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
CDH6P55285 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
CDH6P55285 RNY1P16-201ENST00000363063 111 ntBASIC0.62□□□□□ -2.31
CDH6P55285 Y_RNA.358-201ENST00000365491 99 ntBASIC0.62□□□□□ -2.31
CDH6P55285 RNA5SP118-201ENST00000410385 109 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms