Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 RNA5SP259-201ENST00000365541 109 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 SNORD26-201ENST00000384147 75 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 RNU6-376P-201ENST00000384731 106 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 MIR520G-201ENST00000385064 90 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 MIR628-201ENST00000385229 95 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 BTF3P4-201ENST00000418852 495 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.99□□□□□ -2.25
CRISP3P54108 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.99□□□□□ -2.25
CRISP3P54108 Y_RNA.632-201ENST00000459189 102 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 RNU6-237P-201ENST00000515985 71 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 SNORA70.12-201ENST00000516084 153 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 RNU6-1012P-201ENST00000516606 109 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 Y_RNA.702-201ENST00000516843 96 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 RNU6-699P-201ENST00000517081 110 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 AL358944.1-201ENST00000528537 144 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.99□□□□□ -2.25
CRISP3P54108 MIR4769-201ENST00000584126 77 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 AC091178.2-201ENST00000584401 117 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 VN1R91P-201ENST00000594377 169 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 AP000942.3-201ENST00000603702 160 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 AC084781.2-201ENST00000615568 161 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 AC004467.1-201ENST00000615678 330 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 AC138305.3-201ENST00000624988 240 ntBASIC0.99□□□□□ -2.25
CRISP3P54108 Y_RNA.27-201ENST00000362540 103 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 Y_RNA.428-201ENST00000384078 102 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 MRPS18CP6-201ENST00000423587 223 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 RPS27P16-201ENST00000425758 201 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.98□□□□□ -2.25
CRISP3P54108 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.98□□□□□ -2.25
CRISP3P54108 RNU7-169P-201ENST00000459456 61 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 SNORD19B-201ENST00000459623 84 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 SNORD116.3-201ENST00000517176 78 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 RNU2-12P-201ENST00000517216 168 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.98□□□□□ -2.25
CRISP3P54108 AP002004.2-201ENST00000531656 154 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 AP001485.1-201ENST00000604799 199 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 AL021879.1-201ENST00000611756 288 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 AL078604.3-201ENST00000615580 211 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.98□□□□□ -2.25
CRISP3P54108 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.98□□□□□ -2.25
CRISP3P54108 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CRISP3P54108 Y_RNA.146-201ENST00000363549 102 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 RNU6-961P-201ENST00000363893 105 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 Y_RNA.230-201ENST00000364348 109 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 RNU6-117P-201ENST00000365415 107 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 Y_RNA.463-201ENST00000384271 102 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 RNA5SP482-201ENST00000391269 118 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.97□□□□□ -2.25
CRISP3P54108 HSPE1P13-201ENST00000451143 297 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.97□□□□□ -2.25
CRISP3P54108 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 RPL30P7-201ENST00000479312 323 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 AL163540.1-201ENST00000485382 386 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 RNU2-56P-201ENST00000516826 190 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 AC019176.1-201ENST00000518519 225 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 SUMO2P16-201ENST00000519475 264 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 AL365434.2-201ENST00000607979 234 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 AL138825.1-201ENST00000618587 192 ntBASIC0.97□□□□□ -2.25
CRISP3P54108 AL391987.6-201ENST00000305671 199 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 SNORD115-30-201ENST00000364117 82 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 Y_RNA.265-201ENST00000364677 108 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 Y_RNA.356-201ENST00000365475 113 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 RNU6-926P-201ENST00000384075 107 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 Y_RNA.529-201ENST00000384586 119 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 MIR660-201ENST00000385235 97 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 RNU2-54P-201ENST00000410299 190 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 RNU5A-5P-201ENST00000411054 116 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 STAG3L5P-204ENST00000443759 179 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 RPL39P38-201ENST00000467018 153 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 AC091021.1-201ENST00000468051 388 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.96□□□□□ -2.26
CRISP3P54108 AC023442.1-201ENST00000531247 422 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 AP001094.1-201ENST00000579805 193 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 AC005176.2-201ENST00000596933 147 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 AC240442.1-201ENST00000616055 283 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 AC091925.1-201ENST00000623204 462 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 SNORD3E-202ENST00000627253 216 ntBASIC0.96□□□□□ -2.26
CRISP3P54108 MIR26B-201ENST00000362251 77 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 RNU6-626P-201ENST00000363354 107 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 RNY3P11-201ENST00000364153 102 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 Y_RNA.267-201ENST00000364679 109 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 RNU1-115P-201ENST00000365329 160 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.95□□□□□ -2.26
CRISP3P54108 MT-TD-201ENST00000387419 68 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 SNORA12.1-201ENST00000390873 148 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 AL135790.2-201ENST00000437701 267 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.95□□□□□ -2.26
CRISP3P54108 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.95□□□□□ -2.26
CRISP3P54108 AL512310.8-201ENST00000550183 120 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.95□□□□□ -2.26
CRISP3P54108 MIR4659A-201ENST00000580269 81 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 AL513534.2-201ENST00000603836 250 ntBASIC0.95□□□□□ -2.26
CRISP3P54108 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.94□□□□□ -2.26
CRISP3P54108 Y_RNA.124-201ENST00000363339 93 ntBASIC0.94□□□□□ -2.26
CRISP3P54108 Y_RNA.140-201ENST00000363474 103 ntBASIC0.94□□□□□ -2.26
CRISP3P54108 Y_RNA.252-201ENST00000364556 101 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms