Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL355796.1-201ENST00000406706 323 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMK1P53667 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMK1P53667 SNORA77B-201ENST00000578179 125 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 MIR4795-201ENST00000584182 89 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 AC006380.1-201ENST00000603598 186 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 AC004467.1-201ENST00000615678 330 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 AL353770.2-201ENST00000620024 78 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 AL121890.5-201ENST00000620848 304 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.55□□□□□ -2.16
LIMK1P53667 AC095038.3-201ENST00000634439 195 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 U6.115-201ENST00000636045 103 ntBASIC1.55□□□□□ -2.16
LIMK1P53667 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
LIMK1P53667 Y_RNA.463-201ENST00000384271 102 ntBASIC1.54□□□□□ -2.16
LIMK1P53667 RNU6-376P-201ENST00000384731 106 ntBASIC1.54□□□□□ -2.16
LIMK1P53667 RNU6-440P-201ENST00000390882 105 ntBASIC1.54□□□□□ -2.16
LIMK1P53667 SNORD78.2-201ENST00000391076 69 ntBASIC1.54□□□□□ -2.16
LIMK1P53667 AL606517.2-201ENST00000442855 241 ntBASIC1.54□□□□□ -2.16
LIMK1P53667 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMK1P53667 RPS26P55-201ENST00000471178 356 ntBASIC1.54□□□□□ -2.16
LIMK1P53667 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.54□□□□□ -2.16
LIMK1P53667 AC023442.1-201ENST00000531247 422 ntBASIC1.54□□□□□ -2.16
LIMK1P53667 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.54□□□□□ -2.16
LIMK1P53667 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMK1P53667 AC006600.1-201ENST00000572529 153 ntBASIC1.54□□□□□ -2.16
LIMK1P53667 AC022217.4-201ENST00000604389 163 ntBASIC1.54□□□□□ -2.16
LIMK1P53667 RNU6-961P-201ENST00000363893 105 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 RNU6-454P-201ENST00000364292 107 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 Y_RNA.354-201ENST00000365448 111 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 RNY3P4-201ENST00000384428 101 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 MTCO3P19-201ENST00000415864 321 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 RPL30P13-201ENST00000418873 348 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 AC018865.2-201ENST00000423631 129 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.53□□□□□ -2.16
LIMK1P53667 MTATP6P23-201ENST00000440153 476 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.53□□□□□ -2.16
LIMK1P53667 AC099513.1-201ENST00000490423 301 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 AC097462.1-201ENST00000514125 324 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 MIR4659A-201ENST00000580269 81 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 VN1R91P-201ENST00000594377 169 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 MIR6515-201ENST00000619843 57 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 MIR8054-201ENST00000620877 86 ntBASIC1.53□□□□□ -2.16
LIMK1P53667 MIR410-201ENST00000362222 80 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 SNORA27.1-201ENST00000362604 124 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 RNU6-626P-201ENST00000363354 107 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 Y_RNA.267-201ENST00000364679 109 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 RNU6-53P-201ENST00000365367 106 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 SNORD26-201ENST00000384147 75 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 RNU6-342P-201ENST00000384521 104 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 RNU6-136P-201ENST00000384663 107 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 AL034345.1-201ENST00000407768 123 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 AC022028.1-201ENST00000412054 408 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
LIMK1P53667 RPS27P1-201ENST00000450552 247 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.52□□□□□ -2.17
LIMK1P53667 AC079140.2-201ENST00000506193 142 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 AP002001.1-203ENST00000534002 267 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 AC015720.1-201ENST00000565251 277 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 MIR6078-201ENST00000611069 100 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 AL021879.1-201ENST00000611756 288 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 AC011476.5-201ENST00000615594 130 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 AC018630.2-201ENST00000534866 2403 ntBASIC1.52□□□□□ -2.17
LIMK1P53667 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
LIMK1P53667 Y_RNA.39-201ENST00000362620 98 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 RNU1-22P-201ENST00000363334 158 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 SNORD1A-201ENST00000364968 72 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 MIR873-201ENST00000401120 77 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 AL161935.2-201ENST00000414627 60 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.51□□□□□ -2.17
LIMK1P53667 SUMO1P2-201ENST00000452524 304 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 RNU6-1278P-201ENST00000516130 107 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 RNU6-911P-201ENST00000516523 104 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 RNU7-128P-201ENST00000517247 62 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 MIR3937-201ENST00000580135 106 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 AC005176.2-201ENST00000596933 147 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 AC092447.9-201ENST00000603395 144 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 PVT1_3.1-201ENST00000620853 95 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 AC127459.3-201ENST00000624328 466 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 AC091895.1-201ENST00000624494 256 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 AL008636.1-201ENST00000625038 1018 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.51□□□□□ -2.17
LIMK1P53667 MIR6079-201ENST00000635807 62 ntBASIC1.51□□□□□ -2.17
LIMK1P53667 Y_RNA.27-201ENST00000362540 103 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 RNU6-324P-201ENST00000363957 106 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 Y_RNA.265-201ENST00000364677 108 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 RNA5SP259-201ENST00000365541 109 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 RNU6-20P-201ENST00000384106 107 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 RNU6-708P-201ENST00000384217 107 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 RNU6-1031P-201ENST00000384773 107 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 Y_RNA.579-201ENST00000390939 94 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.5□□□□□ -2.17
LIMK1P53667 RNU7-152P-201ENST00000458982 64 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.5□□□□□ -2.17
LIMK1P53667 SNORA31.10-201ENST00000516482 106 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 AC019176.1-201ENST00000518519 225 ntBASIC1.5□□□□□ -2.17
LIMK1P53667 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms