Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.87□□□□□ -2.55
HTTP42858 RNU6-395P-201ENST00000365662 106 ntBASIC-0.87□□□□□ -2.55
HTTP42858 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.87□□□□□ -2.55
HTTP42858 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.87□□□□□ -2.55
HTTP42858 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.87□□□□□ -2.55
HTTP42858 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.87□□□□□ -2.55
HTTP42858 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.87□□□□□ -2.55
HTTP42858 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.87□□□□□ -2.55
HTTP42858 GMFBP1-201ENST00000467831 427 ntBASIC-0.87□□□□□ -2.55
HTTP42858 RNU7-28P-201ENST00000516759 62 ntBASIC-0.87□□□□□ -2.55
HTTP42858 MIR4637-201ENST00000582405 84 ntBASIC-0.87□□□□□ -2.55
HTTP42858 AC012467.1-201ENST00000607740 256 ntBASIC-0.87□□□□□ -2.55
HTTP42858 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.87□□□□□ -2.55
HTTP42858 CDR1-202ENST00000625883 1485 ntBASIC-0.87□□□□□ -2.55
HTTP42858 MIRLET7C-201ENST00000362160 84 ntBASIC-0.88□□□□□ -2.55
HTTP42858 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.88□□□□□ -2.55
HTTP42858 MIR421-201ENST00000365696 85 ntBASIC-0.88□□□□□ -2.55
HTTP42858 RNU6-205P-201ENST00000390858 107 ntBASIC-0.88□□□□□ -2.55
HTTP42858 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.88□□□□□ -2.55
HTTP42858 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.88□□□□□ -2.55
HTTP42858 PIGPP3-201ENST00000425307 415 ntBASIC-0.88□□□□□ -2.55
HTTP42858 AC103996.1-201ENST00000555468 102 ntBASIC-0.88□□□□□ -2.55
HTTP42858 AC138749.4-201ENST00000563970 127 ntBASIC-0.88□□□□□ -2.55
HTTP42858 AL354696.1-201ENST00000614652 497 ntBASIC-0.88□□□□□ -2.55
HTTP42858 AL354950.2-201ENST00000617939 290 ntBASIC-0.88□□□□□ -2.55
HTTP42858 MTND5P18-201ENST00000445624 1801 ntBASIC-0.88□□□□□ -2.55
HTTP42858 RNU6-167P-201ENST00000384292 106 ntBASIC-0.88□□□□□ -2.55
HTTP42858 AL390729.2-201ENST00000416137 156 ntBASIC-0.88□□□□□ -2.55
HTTP42858 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.88□□□□□ -2.55
HTTP42858 AL445193.1-201ENST00000441183 141 ntBASIC-0.88□□□□□ -2.55
HTTP42858 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
HTTP42858 AC068587.4-201ENST00000533893 186 ntBASIC-0.88□□□□□ -2.55
HTTP42858 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.88□□□□□ -2.55
HTTP42858 AP000676.3-201ENST00000623299 569 ntBASIC-0.88□□□□□ -2.55
HTTP42858 AL008636.1-201ENST00000625038 1018 ntBASIC-0.88□□□□□ -2.55
HTTP42858 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.88□□□□□ -2.55
HTTP42858 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.88□□□□□ -2.55
HTTP42858 AL445523.1-201ENST00000451184 1362 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RNU4-21P-201ENST00000362802 126 ntBASIC-0.89□□□□□ -2.55
HTTP42858 MIR562-201ENST00000384894 95 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.89□□□□□ -2.55
HTTP42858 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.89□□□□□ -2.55
HTTP42858 SNORA70.25-201ENST00000612741 95 ntBASIC-0.89□□□□□ -2.55
HTTP42858 AC022306.2-201ENST00000617563 647 ntBASIC-0.89□□□□□ -2.55
HTTP42858 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RNA5SP475-201ENST00000410568 110 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.89□□□□□ -2.55
HTTP42858 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.89□□□□□ -2.55
HTTP42858 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.89□□□□□ -2.55
HTTP42858 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.89□□□□□ -2.55
HTTP42858 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.89□□□□□ -2.55
HTTP42858 AC079395.1-201ENST00000510981 262 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RNA5SP135-201ENST00000517019 125 ntBASIC-0.89□□□□□ -2.55
HTTP42858 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.89□□□□□ -2.55
HTTP42858 AC091965.4-201ENST00000607691 587 ntBASIC-0.89□□□□□ -2.55
HTTP42858 AC096586.1-201ENST00000610267 561 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RNU6-25P-201ENST00000383873 107 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RNU6-29P-201ENST00000384637 107 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RNU6-376P-201ENST00000384731 106 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RPS29P13-201ENST00000402041 169 ntBASIC-0.89□□□□□ -2.55
HTTP42858 MIR1185-2-201ENST00000408687 86 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RNU7-188P-201ENST00000517063 64 ntBASIC-0.89□□□□□ -2.55
HTTP42858 RNA5SP47-201ENST00000517230 109 ntBASIC-0.89□□□□□ -2.55
HTTP42858 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.89□□□□□ -2.55
HTTP42858 MTND1P36-201ENST00000522384 936 ntBASIC-0.89□□□□□ -2.55
HTTP42858 ZNF321P-202ENST00000550843 495 ntBASIC-0.89□□□□□ -2.55
HTTP42858 AC068880.4-201ENST00000623082 495 ntBASIC-0.89□□□□□ -2.55
HTTP42858 AC010608.3-201ENST00000625048 527 ntBASIC-0.89□□□□□ -2.55
HTTP42858 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.9□□□□□ -2.55
HTTP42858 SNORD115-42-201ENST00000364273 82 ntBASIC-0.9□□□□□ -2.55
HTTP42858 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.9□□□□□ -2.55
HTTP42858 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.9□□□□□ -2.55
HTTP42858 MIR588-201ENST00000384900 83 ntBASIC-0.9□□□□□ -2.55
HTTP42858 MIR518B-201ENST00000385127 83 ntBASIC-0.9□□□□□ -2.55
HTTP42858 RNU6-344P-201ENST00000516635 111 ntBASIC-0.9□□□□□ -2.55
HTTP42858 RNU6-58P-201ENST00000517143 103 ntBASIC-0.9□□□□□ -2.55
HTTP42858 MTND2P38-201ENST00000522536 667 ntBASIC-0.9□□□□□ -2.55
HTTP42858 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.9□□□□□ -2.55
HTTP42858 AC243428.1-201ENST00000421099 264 ntBASIC-0.9□□□□□ -2.55
HTTP42858 MTATP6P17-201ENST00000431030 672 ntBASIC-0.9□□□□□ -2.55
HTTP42858 RNU6-885P-201ENST00000516607 104 ntBASIC-0.9□□□□□ -2.55
HTTP42858 RNA5SP454-201ENST00000517231 127 ntBASIC-0.9□□□□□ -2.55
HTTP42858 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.9□□□□□ -2.55
HTTP42858 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.9□□□□□ -2.55
HTTP42858 AC090615.1-201ENST00000577519 154 ntBASIC-0.9□□□□□ -2.55
HTTP42858 MIR8066-201ENST00000617280 78 ntBASIC-0.9□□□□□ -2.55
HTTP42858 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.91□□□□□ -2.55
HTTP42858 MIR124-2-201ENST00000385081 109 ntBASIC-0.91□□□□□ -2.55
HTTP42858 AC002542.1-201ENST00000440683 193 ntBASIC-0.91□□□□□ -2.55
HTTP42858 USP9YP12-201ENST00000450481 570 ntBASIC-0.91□□□□□ -2.55
HTTP42858 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.91□□□□□ -2.55
HTTP42858 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.91□□□□□ -2.55
HTTP42858 RPL39P36-201ENST00000490784 156 ntBASIC-0.91□□□□□ -2.55
HTTP42858 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.91□□□□□ -2.55
HTTP42858 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.91□□□□□ -2.55
HTTP42858 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.91□□□□□ -2.55
HTTP42858 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.91□□□□□ -2.55
HTTP42858 MTND5P42-201ENST00000637720 498 ntBASIC-0.91□□□□□ -2.55
HTTP42858 Z98949.2-201ENST00000440996 144 ntBASIC-0.91□□□□□ -2.56
HTTP42858 AL158053.1-201ENST00000441503 453 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms