Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 SNORD12-201ENST00000391002 90 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 RNA5SP504-201ENST00000410676 117 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 MTND3P21-201ENST00000433774 331 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 FABP5P4-201ENST00000437203 171 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 AC005002.2-201ENST00000438228 269 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 AP002004.2-201ENST00000531656 154 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 AC245008.1-201ENST00000608123 476 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 RNU6-407P-201ENST00000365280 104 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 Y_RNA.517-201ENST00000384551 106 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
BRCA1P38398 SNORD89-201ENST00000390981 114 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 RNU7-172P-201ENST00000517125 64 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 MIR2355-201ENST00000517199 87 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 AK6P2-201ENST00000549020 471 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 AC093913.1-201ENST00000614178 329 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
BRCA1P38398 MIR6759-201ENST00000638110 65 ntBASIC0.61□□□□□ -2.31
BRCA1P38398 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
BRCA1P38398 Y_RNA.280-201ENST00000364765 112 ntBASIC0.6□□□□□ -2.31
BRCA1P38398 Y_RNA.530-201ENST00000384587 101 ntBASIC0.6□□□□□ -2.31
BRCA1P38398 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.6□□□□□ -2.31
BRCA1P38398 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.6□□□□□ -2.31
BRCA1P38398 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.6□□□□□ -2.31
BRCA1P38398 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.6□□□□□ -2.31
BRCA1P38398 AC113410.1-201ENST00000505029 247 ntBASIC0.6□□□□□ -2.31
BRCA1P38398 AC010598.1-201ENST00000510378 103 ntBASIC0.6□□□□□ -2.31
BRCA1P38398 AC046134.1-201ENST00000514454 666 ntBASIC0.6□□□□□ -2.31
BRCA1P38398 Y_RNA.693-201ENST00000516641 110 ntBASIC0.6□□□□□ -2.31
BRCA1P38398 Y_RNA.706-201ENST00000516933 99 ntBASIC0.6□□□□□ -2.31
BRCA1P38398 AC026407.1-201ENST00000518369 204 ntBASIC0.6□□□□□ -2.31
BRCA1P38398 AC027419.1-201ENST00000522976 328 ntBASIC0.6□□□□□ -2.31
BRCA1P38398 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.6□□□□□ -2.31
BRCA1P38398 RNU4-79P-201ENST00000362764 141 ntBASIC0.59□□□□□ -2.31
BRCA1P38398 RNU6-1252P-201ENST00000363054 104 ntBASIC0.59□□□□□ -2.31
BRCA1P38398 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.59□□□□□ -2.31
BRCA1P38398 MTCO3P19-201ENST00000415864 321 ntBASIC0.59□□□□□ -2.31
BRCA1P38398 TPT1P7-201ENST00000458300 517 ntBASIC0.59□□□□□ -2.31
BRCA1P38398 OR9P1P-201ENST00000496431 281 ntBASIC0.59□□□□□ -2.31
BRCA1P38398 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.59□□□□□ -2.31
BRCA1P38398 Y_RNA.683-201ENST00000516508 93 ntBASIC0.59□□□□□ -2.31
BRCA1P38398 RNU6-506P-201ENST00000516553 94 ntBASIC0.59□□□□□ -2.31
BRCA1P38398 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.59□□□□□ -2.31
BRCA1P38398 Z83818.1-201ENST00000603584 150 ntBASIC0.59□□□□□ -2.31
BRCA1P38398 AC004832.4-201ENST00000608952 331 ntBASIC0.59□□□□□ -2.31
BRCA1P38398 AC022079.1-201ENST00000621546 602 ntBASIC0.59□□□□□ -2.31
BRCA1P38398 Y_RNA.363-201ENST00000365529 113 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 RNU6-1013P-201ENST00000384180 107 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 MIR181A1-201ENST00000385026 110 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 MIR514A2-201ENST00000385131 88 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 MIR514A3-201ENST00000385132 88 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 SNORD111-201ENST00000408139 94 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.58□□□□□ -2.32
BRCA1P38398 AL138726.1-201ENST00000614873 333 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 AC090617.10-201ENST00000624308 134 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 AC008873.1-201ENST00000625051 138 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 ZNF299P-201ENST00000406845 1804 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 MIR410-201ENST00000362222 80 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 MIR100-201ENST00000385259 80 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 RNU1-119P-201ENST00000391122 165 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 RNA5SP299-201ENST00000391203 116 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 AL590632.1-201ENST00000424289 371 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 RNU6-1281P-201ENST00000516223 105 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 AC093023.1-201ENST00000547375 507 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.58□□□□□ -2.32
BRCA1P38398 AC104260.1-201ENST00000616660 539 ntBASIC0.58□□□□□ -2.32
BRCA1P38398 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
BRCA1P38398 SNORA1B-201ENST00000362535 133 ntBASIC0.57□□□□□ -2.32
BRCA1P38398 RNU6-454P-201ENST00000364292 107 ntBASIC0.57□□□□□ -2.32
BRCA1P38398 Y_RNA.267-201ENST00000364679 109 ntBASIC0.57□□□□□ -2.32
BRCA1P38398 RNU6-1156P-201ENST00000410365 100 ntBASIC0.57□□□□□ -2.32
BRCA1P38398 RNU2-64P-201ENST00000411315 191 ntBASIC0.57□□□□□ -2.32
BRCA1P38398 MTCYBP10-201ENST00000424905 650 ntBASIC0.57□□□□□ -2.32
BRCA1P38398 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.57□□□□□ -2.32
BRCA1P38398 AP003327.1-201ENST00000529684 127 ntBASIC0.57□□□□□ -2.32
BRCA1P38398 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.57□□□□□ -2.32
BRCA1P38398 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.57□□□□□ -2.32
BRCA1P38398 AC068647.2-201ENST00000637380 353 ntBASIC0.57□□□□□ -2.32
BRCA1P38398 RNU6-595P-201ENST00000363944 107 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 Y_RNA.330-201ENST00000365230 109 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.56□□□□□ -2.32
BRCA1P38398 Y_RNA.414-201ENST00000384011 101 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 RNU6-1237P-201ENST00000384777 107 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 RNU6-510P-201ENST00000391239 108 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 AC245047.8-201ENST00000456455 284 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.56□□□□□ -2.32
BRCA1P38398 RNU6-917P-201ENST00000516294 104 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 RNU6-1291P-201ENST00000516591 104 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 FRG2DP-202ENST00000566967 323 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 MTND5P16-201ENST00000460269 1703 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 SNORA27.1-201ENST00000362604 124 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 Y_RNA.212-201ENST00000364177 102 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 RNU6-1067P-201ENST00000384752 107 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 MIR136-201ENST00000385207 82 ntBASIC0.56□□□□□ -2.32
BRCA1P38398 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms