Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AL353149.1-201ENST00000610667 244 ntBASIC2.04□□□□□ -2.08
RFC1P35251 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RFC1P35251 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
RFC1P35251 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RFC1P35251 AL391987.6-201ENST00000305671 199 ntBASIC2.03□□□□□ -2.08
RFC1P35251 MIR335-201ENST00000362173 94 ntBASIC2.03□□□□□ -2.08
RFC1P35251 Y_RNA.14-201ENST00000362415 103 ntBASIC2.03□□□□□ -2.08
RFC1P35251 snoU2-30.2-201ENST00000362805 70 ntBASIC2.03□□□□□ -2.08
RFC1P35251 RNU4-80P-201ENST00000363200 141 ntBASIC2.03□□□□□ -2.08
RFC1P35251 RNU6-23P-201ENST00000363283 107 ntBASIC2.03□□□□□ -2.08
RFC1P35251 SNORA33-201ENST00000363664 130 ntBASIC2.03□□□□□ -2.08
RFC1P35251 Y_RNA.172-201ENST00000363765 102 ntBASIC2.03□□□□□ -2.08
RFC1P35251 Y_RNA.288-201ENST00000364854 92 ntBASIC2.03□□□□□ -2.08
RFC1P35251 RNU6-326P-201ENST00000365480 107 ntBASIC2.03□□□□□ -2.08
RFC1P35251 Y_RNA.562-201ENST00000384695 113 ntBASIC2.03□□□□□ -2.08
RFC1P35251 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RFC1P35251 RNU11-3P-201ENST00000391111 133 ntBASIC2.03□□□□□ -2.08
RFC1P35251 RNA5SP212-201ENST00000391223 107 ntBASIC2.03□□□□□ -2.08
RFC1P35251 MIR873-201ENST00000401120 77 ntBASIC2.03□□□□□ -2.08
RFC1P35251 AC244636.1-201ENST00000421152 228 ntBASIC2.03□□□□□ -2.08
RFC1P35251 RNU6-1132P-201ENST00000459214 107 ntBASIC2.03□□□□□ -2.08
RFC1P35251 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RFC1P35251 SERF1AP1-201ENST00000514575 187 ntBASIC2.03□□□□□ -2.08
RFC1P35251 RNU2-31P-201ENST00000516954 155 ntBASIC2.03□□□□□ -2.08
RFC1P35251 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.03□□□□□ -2.08
RFC1P35251 RPL21P9-201ENST00000556149 474 ntBASIC2.03□□□□□ -2.08
RFC1P35251 MIR3935-201ENST00000583472 104 ntBASIC2.03□□□□□ -2.08
RFC1P35251 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
RFC1P35251 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.03□□□□□ -2.08
RFC1P35251 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RFC1P35251 SNORD114-7-201ENST00000362520 77 ntBASIC2.02□□□□□ -2.09
RFC1P35251 RNU6-1266P-201ENST00000362794 105 ntBASIC2.02□□□□□ -2.09
RFC1P35251 RNU6-417P-201ENST00000384712 107 ntBASIC2.02□□□□□ -2.09
RFC1P35251 HMGN2P3-201ENST00000433603 273 ntBASIC2.02□□□□□ -2.09
RFC1P35251 HMGN2P5-201ENST00000436882 273 ntBASIC2.02□□□□□ -2.09
RFC1P35251 ATP5J2P3-201ENST00000451550 258 ntBASIC2.02□□□□□ -2.09
RFC1P35251 RPL23AP42-201ENST00000471152 471 ntBASIC2.02□□□□□ -2.09
RFC1P35251 RNU6-191P-201ENST00000516295 94 ntBASIC2.02□□□□□ -2.09
RFC1P35251 RNU7-128P-201ENST00000517247 62 ntBASIC2.02□□□□□ -2.09
RFC1P35251 AC010900.2-201ENST00000604508 210 ntBASIC2.02□□□□□ -2.09
RFC1P35251 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.02□□□□□ -2.09
RFC1P35251 U1.36-201ENST00000620684 176 ntBASIC2.02□□□□□ -2.09
RFC1P35251 U6.108-201ENST00000637764 58 ntBASIC2.02□□□□□ -2.09
RFC1P35251 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.02□□□□□ -2.09
RFC1P35251 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.02□□□□□ -2.09
RFC1P35251 Y_RNA.307-201ENST00000365022 117 ntBASIC2.01□□□□□ -2.09
RFC1P35251 SNORA8-201ENST00000384574 139 ntBASIC2.01□□□□□ -2.09
RFC1P35251 RNA5SP467-201ENST00000391274 118 ntBASIC2.01□□□□□ -2.09
RFC1P35251 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.01□□□□□ -2.09
RFC1P35251 SUMO1P2-201ENST00000452524 304 ntBASIC2.01□□□□□ -2.09
RFC1P35251 RPS26P55-201ENST00000471178 356 ntBASIC2.01□□□□□ -2.09
RFC1P35251 RNA5SP20-201ENST00000515976 84 ntBASIC2.01□□□□□ -2.09
RFC1P35251 AP005660.1-201ENST00000522972 293 ntBASIC2.01□□□□□ -2.09
RFC1P35251 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.01□□□□□ -2.09
RFC1P35251 MIR3945-201ENST00000581853 98 ntBASIC2.01□□□□□ -2.09
RFC1P35251 AP000942.4-201ENST00000604811 241 ntBASIC2.01□□□□□ -2.09
RFC1P35251 U6.73-201ENST00000619194 103 ntBASIC2.01□□□□□ -2.09
RFC1P35251 AC006435.5-201ENST00000624486 112 ntBASIC2.01□□□□□ -2.09
RFC1P35251 U6.104-201ENST00000637979 90 ntBASIC2.01□□□□□ -2.09
RFC1P35251 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
RFC1P35251 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2□□□□□ -2.09
RFC1P35251 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2□□□□□ -2.09
RFC1P35251 RNU6-862P-201ENST00000362804 105 ntBASIC2□□□□□ -2.09
RFC1P35251 RNU1-96P-201ENST00000364163 162 ntBASIC2□□□□□ -2.09
RFC1P35251 RNU6-407P-201ENST00000365280 104 ntBASIC2□□□□□ -2.09
RFC1P35251 RNU6-117P-201ENST00000365415 107 ntBASIC2□□□□□ -2.09
RFC1P35251 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
RFC1P35251 YWHAEP4-201ENST00000505390 198 ntBASIC2□□□□□ -2.09
RFC1P35251 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2□□□□□ -2.09
RFC1P35251 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2□□□□□ -2.09
RFC1P35251 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RFC1P35251 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RFC1P35251 RNU1-22P-201ENST00000363334 158 ntBASIC1.99□□□□□ -2.09
RFC1P35251 SNORA53-201ENST00000391141 249 ntBASIC1.99□□□□□ -2.09
RFC1P35251 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
RFC1P35251 MIR1253-201ENST00000408273 105 ntBASIC1.99□□□□□ -2.09
RFC1P35251 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
RFC1P35251 RPS27P22-201ENST00000478056 241 ntBASIC1.99□□□□□ -2.09
RFC1P35251 RN7SL429P-201ENST00000479090 223 ntBASIC1.99□□□□□ -2.09
RFC1P35251 RN7SL489P-201ENST00000486185 223 ntBASIC1.99□□□□□ -2.09
RFC1P35251 RN7SL327P-201ENST00000488659 223 ntBASIC1.99□□□□□ -2.09
RFC1P35251 AC091959.1-201ENST00000495857 238 ntBASIC1.99□□□□□ -2.09
RFC1P35251 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.99□□□□□ -2.09
RFC1P35251 RNU6-1337P-201ENST00000516525 95 ntBASIC1.99□□□□□ -2.09
RFC1P35251 MIR4643-201ENST00000577473 78 ntBASIC1.99□□□□□ -2.09
RFC1P35251 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.99□□□□□ -2.09
RFC1P35251 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC1P35251 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.99□□□□□ -2.09
RFC1P35251 RN7SL853P-201ENST00000617250 223 ntBASIC1.99□□□□□ -2.09
RFC1P35251 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
RFC1P35251 AL356292.1-201ENST00000283110 373 ntBASIC1.98□□□□□ -2.09
RFC1P35251 RNU6-801P-201ENST00000364087 105 ntBASIC1.98□□□□□ -2.09
RFC1P35251 Y_RNA.350-201ENST00000365409 98 ntBASIC1.98□□□□□ -2.09
RFC1P35251 Y_RNA.447-201ENST00000384184 113 ntBASIC1.98□□□□□ -2.09
RFC1P35251 SNORD116-13-201ENST00000384408 92 ntBASIC1.98□□□□□ -2.09
RFC1P35251 RN7SL274P-201ENST00000492268 272 ntBASIC1.98□□□□□ -2.09
RFC1P35251 AC097462.1-201ENST00000514125 324 ntBASIC1.98□□□□□ -2.09
RFC1P35251 RNU6-1146P-201ENST00000516282 102 ntBASIC1.98□□□□□ -2.09
RFC1P35251 RNVU1-2-201ENST00000516326 135 ntBASIC1.98□□□□□ -2.09
RFC1P35251 RNU6-63P-201ENST00000516690 95 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms