Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 SCARNA18-201ENST00000459004 134 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 AC097462.1-201ENST00000514125 324 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 SNORA31.14-201ENST00000516728 116 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 RNU7-172P-201ENST00000517125 64 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 AC090572.1-201ENST00000519251 160 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 AC068587.4-201ENST00000533893 186 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 MIR5708-201ENST00000579723 85 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.14□□□□□ -2.59
CLIP1P30622 AC244669.1-204ENST00000621564 178 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 AL445523.1-201ENST00000451184 1362 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 MIR876-201ENST00000401147 81 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 AL117339.3-201ENST00000418733 162 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.15□□□□□ -2.59
CLIP1P30622 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.15□□□□□ -2.59
CLIP1P30622 RNU7-182P-201ENST00000459009 62 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 RNU6-430P-201ENST00000517078 107 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 MIR5692A1-201ENST00000580523 69 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 U7.6-201ENST00000610841 64 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 MIR18B-201ENST00000454574 71 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.15□□□□□ -2.59
CLIP1P30622 SNORD65B-201ENST00000459126 73 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 snoU13.16-201ENST00000459350 104 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 AC010486.3-201ENST00000511602 785 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 SNORA27.4-201ENST00000516650 95 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 AP001836.1-201ENST00000604675 523 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 AC084368.1-201ENST00000620935 65 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 AL162376.1-201ENST00000624117 175 ntBASIC-1.15□□□□□ -2.59
CLIP1P30622 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.16□□□□□ -2.6
CLIP1P30622 RNU2-62P-201ENST00000410868 191 ntBASIC-1.16□□□□□ -2.6
CLIP1P30622 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.16□□□□□ -2.6
CLIP1P30622 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.16□□□□□ -2.6
CLIP1P30622 AL590623.1-201ENST00000427864 105 ntBASIC-1.16□□□□□ -2.6
CLIP1P30622 EPS15P1-201ENST00000448836 336 ntBASIC-1.16□□□□□ -2.6
CLIP1P30622 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.16□□□□□ -2.6
CLIP1P30622 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.16□□□□□ -2.6
CLIP1P30622 AC091959.1-201ENST00000495857 238 ntBASIC-1.16□□□□□ -2.6
CLIP1P30622 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.16□□□□□ -2.6
CLIP1P30622 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.16□□□□□ -2.6
CLIP1P30622 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.16□□□□□ -2.6
CLIP1P30622 uc_338.4-201ENST00000616635 176 ntBASIC-1.16□□□□□ -2.6
CLIP1P30622 RNU6-47P-201ENST00000383866 107 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 AL358934.1-201ENST00000432346 324 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 AC091133.4-201ENST00000511142 308 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 RNU6-881P-201ENST00000516813 102 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.17□□□□□ -2.6
CLIP1P30622 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.17□□□□□ -2.6
CLIP1P30622 MIR4639-201ENST00000584938 69 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 AC006441.5-201ENST00000612680 209 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 AC023158.2-201ENST00000614876 543 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 MIR6740-201ENST00000618268 113 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 AC010608.3-201ENST00000625048 527 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.17□□□□□ -2.6
CLIP1P30622 MTND1P7-201ENST00000632801 297 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 AC091948.2-201ENST00000636510 279 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 AC093726.3-201ENST00000637588 150 ntBASIC-1.17□□□□□ -2.6
CLIP1P30622 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.18□□□□□ -2.6
CLIP1P30622 MTCO3P19-201ENST00000415864 321 ntBASIC-1.18□□□□□ -2.6
CLIP1P30622 AC090844.1-201ENST00000422019 156 ntBASIC-1.18□□□□□ -2.6
CLIP1P30622 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.18□□□□□ -2.6
CLIP1P30622 MTND4LP7-201ENST00000431728 294 ntBASIC-1.18□□□□□ -2.6
CLIP1P30622 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.18□□□□□ -2.6
CLIP1P30622 RNU2-10P-201ENST00000516375 211 ntBASIC-1.18□□□□□ -2.6
CLIP1P30622 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.18□□□□□ -2.6
CLIP1P30622 AC069545.1-201ENST00000605671 358 ntBASIC-1.18□□□□□ -2.6
CLIP1P30622 AF250324.2-201ENST00000608299 610 ntBASIC-1.18□□□□□ -2.6
CLIP1P30622 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.19□□□□□ -2.6
CLIP1P30622 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
CLIP1P30622 RNU6-10P-201ENST00000384036 107 ntBASIC-1.19□□□□□ -2.6
CLIP1P30622 MTCO3P42-201ENST00000509488 518 ntBASIC-1.19□□□□□ -2.6
CLIP1P30622 MTCO3P39-201ENST00000514812 518 ntBASIC-1.19□□□□□ -2.6
CLIP1P30622 RNU6-135P-201ENST00000516769 101 ntBASIC-1.19□□□□□ -2.6
CLIP1P30622 AC105029.1-201ENST00000520250 669 ntBASIC-1.19□□□□□ -2.6
CLIP1P30622 MTATP6P2-201ENST00000603319 678 ntBASIC-1.19□□□□□ -2.6
CLIP1P30622 AP001330.5-201ENST00000607176 411 ntBASIC-1.19□□□□□ -2.6
CLIP1P30622 AC108747.1-201ENST00000609508 535 ntBASIC-1.19□□□□□ -2.6
CLIP1P30622 AC022306.2-201ENST00000617563 647 ntBASIC-1.19□□□□□ -2.6
CLIP1P30622 AC022306.3-201ENST00000619930 550 ntBASIC-1.19□□□□□ -2.6
CLIP1P30622 SNORD114-25-201ENST00000363742 72 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 SNORA22B-201ENST00000383876 138 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 MIR204-201ENST00000385200 110 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 MTND1P32-201ENST00000433043 938 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 AC117522.1-201ENST00000509821 380 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 AC010493.1-201ENST00000513479 292 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 AC021146.6-201ENST00000514659 117 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 AL157687.1-201ENST00000554853 619 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 AC069431.2-201ENST00000604149 1099 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 MIR8066-201ENST00000617280 78 ntBASIC-1.2□□□□□ -2.6
CLIP1P30622 MIR16-2-201ENST00000362117 81 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 RNU6-490P-201ENST00000362985 107 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 SNORD87-201ENST00000364849 89 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 SNORA1-201ENST00000384107 130 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 SNORA51.10-201ENST00000384418 136 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 RNU6-376P-201ENST00000384731 106 ntBASIC-1.21□□□□□ -2.6
CLIP1P30622 AL359672.1-201ENST00000442302 409 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms