Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIR4764-201ENST00000580680 88 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 AL162730.1-201ENST00000605734 292 ntBASIC0.08□□□□□ -2.4
COL4A5P29400 SNORD68-201ENST00000363214 84 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 RNU4-9P-201ENST00000364951 139 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 ZNF885P-201ENST00000420174 1098 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 MRPS18CP6-201ENST00000423587 223 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 PIGPP3-201ENST00000425307 415 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 DAP3P1-201ENST00000441522 278 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 USP9YP29-201ENST00000445112 563 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 AC093027.1-201ENST00000546698 429 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 MIR3915-201ENST00000578518 97 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 AC100830.2-201ENST00000581636 240 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 MIR5692C1-201ENST00000585309 91 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 AC010999.1-201ENST00000611856 324 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 AC100810.6-201ENST00000638068 285 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 MTND5P16-201ENST00000460269 1703 ntBASIC0.07□□□□□ -2.4
COL4A5P29400 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
COL4A5P29400 FGF7P2-201ENST00000332473 296 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 Y_RNA.35-201ENST00000362601 101 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 RNU6-396P-201ENST00000365369 105 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 RNU5A-6P-201ENST00000384136 116 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 RNU6-1103P-201ENST00000384150 107 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 SNORA12.1-201ENST00000390873 148 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 CALM2P3-201ENST00000400429 449 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 AL392103.1-201ENST00000447000 198 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.06□□□□□ -2.4
COL4A5P29400 RNU7-175P-201ENST00000515915 61 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 RNU6-863P-201ENST00000515989 104 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 RN7SKP12-201ENST00000516275 143 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.06□□□□□ -2.4
COL4A5P29400 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.06□□□□□ -2.4
COL4A5P29400 AC022523.2-201ENST00000561045 150 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.06□□□□□ -2.4
COL4A5P29400 AC092747.3-201ENST00000603769 301 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 AL136370.1-201ENST00000608166 691 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 AC091931.1-201ENST00000623488 728 ntBASIC0.06□□□□□ -2.4
COL4A5P29400 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
COL4A5P29400 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 SNORD118-201ENST00000363593 134 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 Y_RNA.169-201ENST00000363745 96 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 Y_RNA.201-201ENST00000364052 96 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 U8.7-201ENST00000364940 136 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 Y_RNA.319-201ENST00000365138 92 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 RNU4-45P-201ENST00000365469 141 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 MIR526A1-201ENST00000384897 85 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 MIR452-201ENST00000385020 85 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 MIR140-201ENST00000385282 100 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 SNORD37.1-201ENST00000390968 65 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 MIR450B-201ENST00000401182 78 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 AC243428.1-201ENST00000421099 264 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.05□□□□□ -2.4
COL4A5P29400 MRPS10P1-201ENST00000448483 130 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 RNU7-180P-201ENST00000459240 63 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 RNU6-977P-201ENST00000516411 103 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.05□□□□□ -2.4
COL4A5P29400 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.05□□□□□ -2.4
COL4A5P29400 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.05□□□□□ -2.4
COL4A5P29400 MIR4645-201ENST00000583158 77 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 POLR3GP2-201ENST00000588366 668 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 AL158063.1-201ENST00000615349 536 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 AL158209.2-201ENST00000619266 216 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 AC092634.7-201ENST00000621022 103 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 MT-TH-201ENST00000387441 69 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.05□□□□□ -2.4
COL4A5P29400 USMG5P1-201ENST00000425964 177 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.05□□□□□ -2.4
COL4A5P29400 MTND3P16-201ENST00000452205 344 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 Y_RNA.654-201ENST00000497848 106 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 RNA5SP401-201ENST00000515920 127 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 SNORA19.2-201ENST00000516013 114 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 RNU6-1291P-201ENST00000516591 104 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 SNORA74.3-201ENST00000517108 154 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 AC040904.1-201ENST00000590850 223 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
COL4A5P29400 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
COL4A5P29400 SNORD44.1-201ENST00000363202 61 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 Y_RNA.151-201ENST00000363566 112 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 RNY3-201ENST00000365484 102 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 Y_RNA.551-201ENST00000384661 102 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 SNX3P1X-201ENST00000414887 175 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.04□□□□□ -2.4
COL4A5P29400 MTCO2P30-201ENST00000503662 364 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.04□□□□□ -2.4
COL4A5P29400 SNORA68.3-201ENST00000515906 83 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 RNU6-1129P-201ENST00000515964 104 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 SNORA18.7-201ENST00000516910 131 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 AC141557.1-201ENST00000540982 400 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.04□□□□□ -2.4
COL4A5P29400 UBL5P4-201ENST00000562584 236 ntBASIC0.04□□□□□ -2.4
COL4A5P29400 MIR103A1-201ENST00000362165 78 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 SNORD114-7-201ENST00000362520 77 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 RNU6-934P-201ENST00000365154 107 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 Y_RNA.415-201ENST00000384012 112 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 Y_RNA.481-201ENST00000384373 102 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 MIR487A-201ENST00000385009 80 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 MIR214-201ENST00000385214 110 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 MIR1827-201ENST00000408549 66 ntBASIC0.03□□□□□ -2.4
COL4A5P29400 RNU6-177P-201ENST00000411257 104 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms