Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC004467.1-201ENST00000615678 330 ntBASIC1.6□□□□□ -2.15
CAPN3P20807 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CAPN3P20807 AL391987.6-201ENST00000305671 199 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 RNU6-454P-201ENST00000364292 107 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 Y_RNA.267-201ENST00000364679 109 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 RNU6-392P-201ENST00000364926 101 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 RNU6-926P-201ENST00000384075 107 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 RNA5SP482-201ENST00000391269 118 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 MIR1276-201ENST00000408707 83 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.59□□□□□ -2.15
CAPN3P20807 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.59□□□□□ -2.15
CAPN3P20807 MTND5P20-201ENST00000448677 143 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.59□□□□□ -2.15
CAPN3P20807 AC091021.1-201ENST00000468051 388 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 FGF7P4-201ENST00000509595 295 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.59□□□□□ -2.15
CAPN3P20807 AL358944.1-201ENST00000528537 144 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 AC023442.1-201ENST00000531247 422 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 VN1R91P-201ENST00000594377 169 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 AC005176.2-201ENST00000596933 147 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 AC084781.2-201ENST00000615568 161 ntBASIC1.59□□□□□ -2.15
CAPN3P20807 Y_RNA.27-201ENST00000362540 103 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 RNU4-76P-201ENST00000364509 141 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 Y_RNA.327-201ENST00000365201 102 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 MIR613-201ENST00000385248 95 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.58□□□□□ -2.16
CAPN3P20807 RPL39P38-201ENST00000467018 153 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 AC091951.2-201ENST00000500762 203 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 SNORD116.3-201ENST00000517176 78 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 AP002001.1-203ENST00000534002 267 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 AL355375.2-201ENST00000574825 175 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 MIR548S-201ENST00000581352 82 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 MIR8065-201ENST00000620577 100 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.58□□□□□ -2.16
CAPN3P20807 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CAPN3P20807 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CAPN3P20807 Y_RNA.146-201ENST00000363549 102 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 Y_RNA.187-201ENST00000363918 113 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 Y_RNA.263-201ENST00000364659 114 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 MIR559-201ENST00000385188 96 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 HSPE1P13-201ENST00000451143 297 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 AC009474.2-201ENST00000451383 136 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 RNU7-95P-201ENST00000459222 64 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 RNA5SP220-201ENST00000516298 104 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 RNU6-875P-201ENST00000516488 106 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 Y_RNA.702-201ENST00000516843 96 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 RNU2-12P-201ENST00000517216 168 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 AL512310.8-201ENST00000550183 120 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.57□□□□□ -2.16
CAPN3P20807 AC091178.2-201ENST00000584401 117 ntBASIC1.57□□□□□ -2.16
CAPN3P20807 Y_RNA.230-201ENST00000364348 109 ntBASIC1.56□□□□□ -2.16
CAPN3P20807 RNY1P14-201ENST00000384426 108 ntBASIC1.56□□□□□ -2.16
CAPN3P20807 SNORD116-29-201ENST00000384516 83 ntBASIC1.56□□□□□ -2.16
CAPN3P20807 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.56□□□□□ -2.16
CAPN3P20807 RNU6-699P-201ENST00000517081 110 ntBASIC1.56□□□□□ -2.16
CAPN3P20807 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.56□□□□□ -2.16
CAPN3P20807 Y_RNA.112-201ENST00000363250 102 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 Y_RNA.191-201ENST00000363972 113 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.55□□□□□ -2.16
CAPN3P20807 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 RNU2-54P-201ENST00000410299 190 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 RN7SKP101-201ENST00000411376 320 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 MRPS18CP6-201ENST00000423587 223 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.55□□□□□ -2.16
CAPN3P20807 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.55□□□□□ -2.16
CAPN3P20807 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.55□□□□□ -2.16
CAPN3P20807 Y_RNA.632-201ENST00000459189 102 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 RNU6-322P-201ENST00000516010 103 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 RNU6-1012P-201ENST00000516606 109 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 RN7SKP88-201ENST00000516847 250 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 AL513534.2-201ENST00000603836 250 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 7SK.8-201ENST00000612110 250 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 7SK.11-201ENST00000615477 250 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 7SK.13-201ENST00000622040 250 ntBASIC1.55□□□□□ -2.16
CAPN3P20807 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.55□□□□□ -2.16
CAPN3P20807 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.54□□□□□ -2.16
CAPN3P20807 RNU6-199P-201ENST00000362954 107 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 RNU6-961P-201ENST00000363893 105 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 SNORD115-30-201ENST00000364117 82 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 RNU6-117P-201ENST00000365415 107 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 Y_RNA.356-201ENST00000365475 113 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CAPN3P20807 RN7SKP51-201ENST00000410781 304 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 SDAD1P3-201ENST00000427380 333 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 AC233266.1-201ENST00000454518 96 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 RNU7-152P-201ENST00000458982 64 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 SNORD19B-201ENST00000459623 84 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 AL049830.1-201ENST00000468034 425 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 RNU6-1096P-201ENST00000517089 102 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 AC006600.1-201ENST00000572529 153 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 MIR4659A-201ENST00000580269 81 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 MIR4303-201ENST00000581299 66 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 AL078603.1-201ENST00000603824 313 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 AC242852.1-201ENST00000612151 96 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 AC244015.1-201ENST00000622301 99 ntBASIC1.54□□□□□ -2.16
CAPN3P20807 SNORA1B-201ENST00000362535 133 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 Y_RNA.39-201ENST00000362620 98 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 RNU4-13P-201ENST00000364019 141 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 Y_RNA.361-201ENST00000365515 120 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms