Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNU7-185P-201ENST00000459215 60 ntBASIC-1.56□□□□□ -2.66
HMGA1P17096 RNU6-221P-201ENST00000459541 99 ntBASIC-1.56□□□□□ -2.66
HMGA1P17096 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.56□□□□□ -2.66
HMGA1P17096 FRG2DP-202ENST00000566967 323 ntBASIC-1.56□□□□□ -2.66
HMGA1P17096 MIR4264-201ENST00000583520 66 ntBASIC-1.56□□□□□ -2.66
HMGA1P17096 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.56□□□□□ -2.66
HMGA1P17096 AC231657.1-201ENST00000624313 397 ntBASIC-1.56□□□□□ -2.66
HMGA1P17096 U3.4-201ENST00000363352 213 ntBASIC-1.57□□□□□ -2.66
HMGA1P17096 RNU6-226P-201ENST00000363778 107 ntBASIC-1.57□□□□□ -2.66
HMGA1P17096 SNORA63C-201ENST00000364578 129 ntBASIC-1.57□□□□□ -2.66
HMGA1P17096 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.57□□□□□ -2.66
HMGA1P17096 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.57□□□□□ -2.66
HMGA1P17096 SNORD28B-201ENST00000390993 75 ntBASIC-1.57□□□□□ -2.66
HMGA1P17096 RPL23AP30-201ENST00000432419 501 ntBASIC-1.57□□□□□ -2.66
HMGA1P17096 AC012467.1-201ENST00000607740 256 ntBASIC-1.57□□□□□ -2.66
HMGA1P17096 AC078880.5-201ENST00000617845 421 ntBASIC-1.57□□□□□ -2.66
HMGA1P17096 AP002782.1-201ENST00000623107 614 ntBASIC-1.57□□□□□ -2.66
HMGA1P17096 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.58□□□□□ -2.66
HMGA1P17096 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.58□□□□□ -2.66
HMGA1P17096 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.58□□□□□ -2.66
HMGA1P17096 MTND4P24-201ENST00000424002 397 ntBASIC-1.58□□□□□ -2.66
HMGA1P17096 AC006210.1-201ENST00000424882 111 ntBASIC-1.58□□□□□ -2.66
HMGA1P17096 Z94722.1-201ENST00000604328 474 ntBASIC-1.58□□□□□ -2.66
HMGA1P17096 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.58□□□□□ -2.66
HMGA1P17096 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.58□□□□□ -2.66
HMGA1P17096 MIR1264-201ENST00000616374 69 ntBASIC-1.58□□□□□ -2.66
HMGA1P17096 AC244669.1-204ENST00000621564 178 ntBASIC-1.58□□□□□ -2.66
HMGA1P17096 RNU6-777P-201ENST00000364265 104 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 RNU6-336P-201ENST00000364891 107 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 SNORD28-201ENST00000384706 75 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 MIR876-201ENST00000401147 81 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 RNU6-721P-201ENST00000410155 105 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.59□□□□□ -2.66
HMGA1P17096 AC012306.1-201ENST00000423267 114 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 BTBD7P2-201ENST00000441962 620 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.59□□□□□ -2.66
HMGA1P17096 MTCO3P8-201ENST00000453691 755 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 MIR18B-201ENST00000454574 71 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 AC107027.2-201ENST00000512197 115 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 SNORA31.14-201ENST00000516728 116 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 AC068587.4-201ENST00000533893 186 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.59□□□□□ -2.66
HMGA1P17096 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.59□□□□□ -2.66
HMGA1P17096 SNORD68-201ENST00000363214 84 ntBASIC-1.6□□□□□ -2.67
HMGA1P17096 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.6□□□□□ -2.67
HMGA1P17096 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.6□□□□□ -2.67
HMGA1P17096 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.6□□□□□ -2.67
HMGA1P17096 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.6□□□□□ -2.67
HMGA1P17096 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.6□□□□□ -2.67
HMGA1P17096 AC021146.9-201ENST00000512503 156 ntBASIC-1.6□□□□□ -2.67
HMGA1P17096 RNU6-377P-201ENST00000515965 102 ntBASIC-1.6□□□□□ -2.67
HMGA1P17096 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.6□□□□□ -2.67
HMGA1P17096 AC013244.3-201ENST00000605614 388 ntBASIC-1.6□□□□□ -2.67
HMGA1P17096 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.6□□□□□ -2.67
HMGA1P17096 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.61□□□□□ -2.67
HMGA1P17096 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.61□□□□□ -2.67
HMGA1P17096 snoU13.16-201ENST00000459350 104 ntBASIC-1.61□□□□□ -2.67
HMGA1P17096 AC021451.1-201ENST00000523498 1129 ntBASIC-1.61□□□□□ -2.67
HMGA1P17096 AL157687.1-201ENST00000554853 619 ntBASIC-1.61□□□□□ -2.67
HMGA1P17096 MTND1P8-201ENST00000571424 950 ntBASIC-1.61□□□□□ -2.67
HMGA1P17096 AC107905.1-201ENST00000616204 426 ntBASIC-1.61□□□□□ -2.67
HMGA1P17096 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.62□□□□□ -2.67
HMGA1P17096 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.62□□□□□ -2.67
HMGA1P17096 Y_RNA.100-201ENST00000363141 102 ntBASIC-1.62□□□□□ -2.67
HMGA1P17096 SNORD65.1-201ENST00000390889 71 ntBASIC-1.62□□□□□ -2.67
HMGA1P17096 RNA5SP261-201ENST00000410536 106 ntBASIC-1.62□□□□□ -2.67
HMGA1P17096 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.62□□□□□ -2.67
HMGA1P17096 RNY4P37-201ENST00000516225 96 ntBASIC-1.62□□□□□ -2.67
HMGA1P17096 RNU6-341P-201ENST00000516973 96 ntBASIC-1.62□□□□□ -2.67
HMGA1P17096 MIR4639-201ENST00000584938 69 ntBASIC-1.62□□□□□ -2.67
HMGA1P17096 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.62□□□□□ -2.67
HMGA1P17096 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.63□□□□□ -2.67
HMGA1P17096 SNORD114-3-201ENST00000364969 75 ntBASIC-1.63□□□□□ -2.67
HMGA1P17096 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.63□□□□□ -2.67
HMGA1P17096 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.63□□□□□ -2.67
HMGA1P17096 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.63□□□□□ -2.67
HMGA1P17096 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.63□□□□□ -2.67
HMGA1P17096 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.63□□□□□ -2.67
HMGA1P17096 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.63□□□□□ -2.67
HMGA1P17096 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.63□□□□□ -2.67
HMGA1P17096 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.63□□□□□ -2.67
HMGA1P17096 AC004223.4-201ENST00000612426 332 ntBASIC-1.63□□□□□ -2.67
HMGA1P17096 MIR382-201ENST00000637119 76 ntBASIC-1.63□□□□□ -2.67
HMGA1P17096 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 RNU6-25P-201ENST00000383873 107 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 RNU6-29P-201ENST00000384637 107 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 AL358934.1-201ENST00000432346 324 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 MRPS10P1-201ENST00000448483 130 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 GMFBP1-201ENST00000467831 427 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-1.64□□□□□ -2.67
HMGA1P17096 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.64□□□□□ -2.67
HMGA1P17096 MIR548AR-201ENST00000582191 57 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 AC069431.2-201ENST00000604149 1099 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 AC072039.2-201ENST00000608883 439 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 AC022306.2-201ENST00000617563 647 ntBASIC-1.64□□□□□ -2.67
HMGA1P17096 AL445523.1-201ENST00000451184 1362 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms