Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
HLA-DOAP06340 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DOAP06340 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.58□□□□□ -2
HLA-DOAP06340 RNA5SP125-201ENST00000364843 120 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 U8.7-201ENST00000364940 136 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 MIR626-201ENST00000385032 94 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 MT-TT-201ENST00000387460 66 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 RNU6-383P-201ENST00000410864 94 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 HMGN2P18-201ENST00000450680 270 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 AC080013.2-201ENST00000460866 323 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 AC117454.1-201ENST00000491120 168 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 RNU6-1337P-201ENST00000516525 95 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DOAP06340 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DOAP06340 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DOAP06340 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HLA-DOAP06340 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DOAP06340 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 MIR4753-201ENST00000585119 83 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 AL355297.2-201ENST00000604792 129 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HLA-DOAP06340 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
HLA-DOAP06340 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DOAP06340 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
HLA-DOAP06340 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
HLA-DOAP06340 AL356292.1-201ENST00000283110 373 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 RNU6-969P-201ENST00000383900 105 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 Y_RNA.456-201ENST00000384232 111 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 RNU6-975P-201ENST00000384296 105 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 SNORA48.3-201ENST00000391081 134 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 AC016909.1-201ENST00000415916 166 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DOAP06340 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DOAP06340 RPS20P10-201ENST00000451209 253 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 AC245047.8-201ENST00000456455 284 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DOAP06340 AL356280.1-201ENST00000603614 379 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 RPL17P51-201ENST00000605218 238 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 AC068647.2-201ENST00000637380 353 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 AC138915.1-201ENST00000565427 1685 ntBASIC2.57□□□□□ -2
HLA-DOAP06340 AC007336.1-201ENST00000576365 3828 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 AP006437.1-201ENST00000641440 3685 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 RNU6-407P-201ENST00000365280 104 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 RNA5SP240-201ENST00000365355 128 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 RNY1P5-201ENST00000383890 115 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 HSPE1P21-201ENST00000438283 308 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 RPL23AP7-203ENST00000449021 469 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 RNU6-561P-201ENST00000516222 102 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 AC018630.3-201ENST00000542637 96 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 AC108706.1-201ENST00000611053 297 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 snoZ196.1-201ENST00000625269 89 ntBASIC2.56□□□□□ -2
HLA-DOAP06340 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DOAP06340 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DOAP06340 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DOAP06340 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.55□□□□□ -2
HLA-DOAP06340 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DOAP06340 SNORA27.1-201ENST00000362604 124 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 Y_RNA.75-201ENST00000362927 97 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 RNU6-899P-201ENST00000363947 107 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 SNORD31B-201ENST00000364977 69 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 SNORA67.3-201ENST00000384366 140 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 MIR95-201ENST00000385072 81 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 MIR300-201ENST00000401138 83 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 RNU6-710P-201ENST00000410424 105 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 RNU2-48P-201ENST00000410694 191 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 HMGN2P3-201ENST00000433603 273 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 HMGN2P5-201ENST00000436882 273 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DOAP06340 RNU6-221P-201ENST00000459541 99 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 AC006483.1-201ENST00000487308 313 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DOAP06340 Y_RNA.797-201ENST00000515977 94 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 RNU6-991P-201ENST00000516168 107 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 RNU6-1007P-201ENST00000516586 107 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DOAP06340 AC022616.8-201ENST00000533569 253 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 AC004486.1-201ENST00000546846 233 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DOAP06340 AC132825.6-201ENST00000638861 357 ntBASIC2.55□□□□□ -2
HLA-DOAP06340 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HLA-DOAP06340 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
HLA-DOAP06340 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DOAP06340 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DOAP06340 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DOAP06340 RNU6-1205P-201ENST00000363625 106 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 RNU6-704P-201ENST00000364162 103 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 RNU6-438P-201ENST00000365561 103 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 RNU6-136P-201ENST00000384663 107 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 SNORA8.3-201ENST00000384679 139 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 RNU6-578P-201ENST00000390980 103 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 MIR873-201ENST00000401120 77 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 AL355497.1-201ENST00000406262 551 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 MIR1289-2-201ENST00000408360 111 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DOAP06340 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DOAP06340 AL445687.1-201ENST00000439946 251 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 CYP2C59P-201ENST00000457790 269 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 AC016925.1-201ENST00000458303 298 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms