Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 MIR4781-201ENST00000585250 76 ntBASIC1.74□□□□□ -2.13
RAF1P04049 AC005786.1-201ENST00000588553 154 ntBASIC1.74□□□□□ -2.13
RAF1P04049 AC005828.6-201ENST00000606610 232 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.15-201ENST00000611544 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.16-201ENST00000613119 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.12-201ENST00000613778 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.20-201ENST00000613956 192 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.9-201ENST00000615427 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.11-201ENST00000616345 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.2-201ENST00000616535 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.3-201ENST00000617785 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.19-201ENST00000618602 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 RNU2-1-201ENST00000618664 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.6-201ENST00000619225 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.5-201ENST00000619465 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 U2.10-201ENST00000620268 191 ntBASIC1.74□□□□□ -2.13
RAF1P04049 MIR8062-201ENST00000621515 85 ntBASIC1.74□□□□□ -2.13
RAF1P04049 MIR337-201ENST00000362281 93 ntBASIC1.73□□□□□ -2.13
RAF1P04049 SNORD115-30-201ENST00000364117 82 ntBASIC1.73□□□□□ -2.13
RAF1P04049 Y_RNA.331-201ENST00000365267 102 ntBASIC1.73□□□□□ -2.13
RAF1P04049 Y_RNA.376-201ENST00000365638 108 ntBASIC1.73□□□□□ -2.13
RAF1P04049 RNU6-21P-201ENST00000384710 107 ntBASIC1.73□□□□□ -2.13
RAF1P04049 SNORA48.1-201ENST00000390879 135 ntBASIC1.73□□□□□ -2.13
RAF1P04049 Y_RNA.581-201ENST00000391017 97 ntBASIC1.73□□□□□ -2.13
RAF1P04049 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.73□□□□□ -2.13
RAF1P04049 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.73□□□□□ -2.13
RAF1P04049 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.73□□□□□ -2.13
RAF1P04049 AC005042.3-201ENST00000453230 174 ntBASIC1.73□□□□□ -2.13
RAF1P04049 RNU6-1041P-201ENST00000516254 102 ntBASIC1.73□□□□□ -2.13
RAF1P04049 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.73□□□□□ -2.13
RAF1P04049 AL161670.1-201ENST00000554348 137 ntBASIC1.73□□□□□ -2.13
RAF1P04049 SNORD113-5-201ENST00000607261 78 ntBASIC1.73□□□□□ -2.13
RAF1P04049 snoU13.31-201ENST00000607291 104 ntBASIC1.73□□□□□ -2.13
RAF1P04049 Y_RNA.783-201ENST00000613546 102 ntBASIC1.73□□□□□ -2.13
RAF1P04049 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RAF1P04049 Y_RNA.84-201ENST00000363011 104 ntBASIC1.72□□□□□ -2.13
RAF1P04049 RNU6-1240P-201ENST00000365155 104 ntBASIC1.72□□□□□ -2.13
RAF1P04049 SNORA20B-201ENST00000384220 132 ntBASIC1.72□□□□□ -2.13
RAF1P04049 RNU6-472P-201ENST00000384299 107 ntBASIC1.72□□□□□ -2.13
RAF1P04049 Y_RNA.541-201ENST00000384640 113 ntBASIC1.72□□□□□ -2.13
RAF1P04049 RNU6-713P-201ENST00000384761 107 ntBASIC1.72□□□□□ -2.13
RAF1P04049 MT-TW-201ENST00000387382 68 ntBASIC1.72□□□□□ -2.13
RAF1P04049 RNA5SP212-201ENST00000391223 107 ntBASIC1.72□□□□□ -2.13
RAF1P04049 MIR1287-201ENST00000408492 90 ntBASIC1.72□□□□□ -2.13
RAF1P04049 AC008134.1-201ENST00000420943 193 ntBASIC1.72□□□□□ -2.13
RAF1P04049 ATP5J2P3-201ENST00000451550 258 ntBASIC1.72□□□□□ -2.13
RAF1P04049 AC011406.1-201ENST00000512440 370 ntBASIC1.72□□□□□ -2.13
RAF1P04049 RNU6-436P-201ENST00000516171 114 ntBASIC1.72□□□□□ -2.13
RAF1P04049 RNU6-570P-201ENST00000517051 105 ntBASIC1.72□□□□□ -2.13
RAF1P04049 AC110588.1-201ENST00000559699 137 ntBASIC1.72□□□□□ -2.13
RAF1P04049 MIR5089-201ENST00000580047 84 ntBASIC1.72□□□□□ -2.13
RAF1P04049 AC006380.1-201ENST00000603598 186 ntBASIC1.72□□□□□ -2.13
RAF1P04049 AC022513.1-201ENST00000624512 117 ntBASIC1.72□□□□□ -2.13
RAF1P04049 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.72□□□□□ -2.13
RAF1P04049 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.72□□□□□ -2.13
RAF1P04049 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RAF1P04049 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RAF1P04049 MIR378A-201ENST00000362177 66 ntBASIC1.71□□□□□ -2.14
RAF1P04049 Y_RNA.361-201ENST00000365515 120 ntBASIC1.71□□□□□ -2.14
RAF1P04049 Y_RNA.396-201ENST00000383949 103 ntBASIC1.71□□□□□ -2.14
RAF1P04049 RNU6-574P-201ENST00000384265 107 ntBASIC1.71□□□□□ -2.14
RAF1P04049 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
RAF1P04049 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.71□□□□□ -2.14
RAF1P04049 AC010598.1-201ENST00000510378 103 ntBASIC1.71□□□□□ -2.14
RAF1P04049 AC027419.1-201ENST00000522976 328 ntBASIC1.71□□□□□ -2.14
RAF1P04049 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.71□□□□□ -2.14
RAF1P04049 MIR5094-201ENST00000578766 85 ntBASIC1.71□□□□□ -2.14
RAF1P04049 MIR4503-201ENST00000582187 83 ntBASIC1.71□□□□□ -2.14
RAF1P04049 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.71□□□□□ -2.14
RAF1P04049 AC127459.3-201ENST00000624328 466 ntBASIC1.71□□□□□ -2.14
RAF1P04049 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RAF1P04049 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.71□□□□□ -2.14
RAF1P04049 Y_RNA.16-201ENST00000362421 102 ntBASIC1.7□□□□□ -2.14
RAF1P04049 RNU4-90P-201ENST00000362773 141 ntBASIC1.7□□□□□ -2.14
RAF1P04049 RNU6-1266P-201ENST00000362794 105 ntBASIC1.7□□□□□ -2.14
RAF1P04049 Y_RNA.144-201ENST00000363521 113 ntBASIC1.7□□□□□ -2.14
RAF1P04049 RNU6-324P-201ENST00000363957 106 ntBASIC1.7□□□□□ -2.14
RAF1P04049 Y_RNA.287-201ENST00000364853 94 ntBASIC1.7□□□□□ -2.14
RAF1P04049 Y_RNA.329-201ENST00000365209 107 ntBASIC1.7□□□□□ -2.14
RAF1P04049 RNU6-196P-201ENST00000384315 107 ntBASIC1.7□□□□□ -2.14
RAF1P04049 Y_RNA.483-201ENST00000384380 101 ntBASIC1.7□□□□□ -2.14
RAF1P04049 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RAF1P04049 AL031003.1-201ENST00000404229 172 ntBASIC1.7□□□□□ -2.14
RAF1P04049 AL117342.1-201ENST00000404861 406 ntBASIC1.7□□□□□ -2.14
RAF1P04049 RNU6-1203P-201ENST00000410703 110 ntBASIC1.7□□□□□ -2.14
RAF1P04049 AL139156.1-201ENST00000412785 841 ntBASIC1.7□□□□□ -2.14
RAF1P04049 HMGN2P34-201ENST00000437647 269 ntBASIC1.7□□□□□ -2.14
RAF1P04049 RPL23AP63-201ENST00000498752 471 ntBASIC1.7□□□□□ -2.14
RAF1P04049 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RAF1P04049 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.7□□□□□ -2.14
RAF1P04049 MIR3684-201ENST00000579779 74 ntBASIC1.7□□□□□ -2.14
RAF1P04049 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.7□□□□□ -2.14
RAF1P04049 MIR338-201ENST00000636369 67 ntBASIC1.7□□□□□ -2.14
RAF1P04049 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
RAF1P04049 WWP1P1-201ENST00000466609 2769 ntBASIC1.69□□□□□ -2.14
RAF1P04049 SNORA27.1-201ENST00000362604 124 ntBASIC1.69□□□□□ -2.14
RAF1P04049 RNU6-862P-201ENST00000362804 105 ntBASIC1.69□□□□□ -2.14
RAF1P04049 snoU2-30.2-201ENST00000362805 70 ntBASIC1.69□□□□□ -2.14
RAF1P04049 Y_RNA.124-201ENST00000363339 93 ntBASIC1.69□□□□□ -2.14
RAF1P04049 Y_RNA.383-201ENST00000383855 97 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 292.9 ms