Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RPS27P22-201ENST00000478056 241 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.5□□□□□ -2.33
COL4A1P02462 RNU4-57P-201ENST00000515980 135 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 RNU7-12P-201ENST00000516030 62 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 RNU4-49P-201ENST00000516080 140 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 RNU6-273P-201ENST00000516937 96 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 RNU6-165P-201ENST00000517170 99 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 AC023157.2-201ENST00000540596 141 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 RPL21P9-201ENST00000556149 474 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.5□□□□□ -2.33
COL4A1P02462 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.5□□□□□ -2.33
COL4A1P02462 MIR4661-201ENST00000582720 75 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 AC022432.1-201ENST00000595739 310 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 AC002553.4-201ENST00000616896 331 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 AC027335.2-201ENST00000624030 375 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 RNA5SP327-201ENST00000362494 101 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 Y_RNA.89-201ENST00000363031 102 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 RNU6-454P-201ENST00000364292 107 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 Y_RNA.415-201ENST00000384012 112 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 RNU6-793P-201ENST00000384233 104 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 Y_RNA.549-201ENST00000384657 102 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 Y_RNA.557-201ENST00000384680 107 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AC074085.1-201ENST00000413598 418 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AL606490.4-201ENST00000423117 127 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 EIF1P2-201ENST00000428233 350 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AC245047.3-201ENST00000429428 127 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 DAP3P1-201ENST00000441522 278 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 UBE2V1P7-201ENST00000446395 340 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AC010598.1-201ENST00000510378 103 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AC093303.1-201ENST00000514549 295 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 RNU6-720P-201ENST00000516363 108 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 RNA5SP168-201ENST00000516642 112 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 SNORA70.22-201ENST00000517160 124 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AP003327.1-201ENST00000529684 127 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AC090049.2-201ENST00000550377 109 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 ZNF299P-201ENST00000406845 1804 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 Y_RNA.135-201ENST00000363439 95 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 Y_RNA.157-201ENST00000363638 102 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 Y_RNA.498-201ENST00000384460 102 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 RNU6-136P-201ENST00000384663 107 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 MIR329-1-201ENST00000385028 80 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 U8.16-201ENST00000391279 133 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 MIR891A-201ENST00000401237 79 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.49□□□□□ -2.33
COL4A1P02462 RPL39P38-201ENST00000467018 153 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 RPS26P48-201ENST00000491713 339 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 RNU6-322P-201ENST00000516010 103 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 RNU7-40P-201ENST00000516397 64 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 RNU1-54P-201ENST00000517181 120 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AC091144.1-201ENST00000519573 138 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AF235103.2-201ENST00000525753 346 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AC093023.1-201ENST00000547375 507 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AC019288.1-201ENST00000557918 224 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AC015688.6-201ENST00000577737 104 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 PRELID3BP2-201ENST00000605362 201 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AL021879.1-201ENST00000611756 288 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 AC006435.5-201ENST00000624486 112 ntBASIC0.49□□□□□ -2.33
COL4A1P02462 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
COL4A1P02462 Y_RNA.3-201ENST00000362331 103 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 RNU6-833P-201ENST00000363486 107 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 RNU4-67P-201ENST00000364569 141 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 Y_RNA.265-201ENST00000364677 108 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 Y_RNA.339-201ENST00000365325 102 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 Y_RNA.358-201ENST00000365491 99 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
COL4A1P02462 Y_RNA.559-201ENST00000384686 107 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 MIR329-2-201ENST00000385029 84 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 RNU6-910P-201ENST00000390844 107 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 RNU6-700P-201ENST00000391043 107 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 RNU6-159P-201ENST00000391080 106 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 MRPL42P3-201ENST00000401492 326 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 RNU6-1148P-201ENST00000410992 104 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AC008134.1-201ENST00000420943 193 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 MTCYBP10-201ENST00000424905 650 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.48□□□□□ -2.33
COL4A1P02462 HSPE1P13-201ENST00000451143 297 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.48□□□□□ -2.33
COL4A1P02462 AL133373.1-201ENST00000497098 94 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.48□□□□□ -2.33
COL4A1P02462 AC026782.1-201ENST00000512952 449 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AC097462.1-201ENST00000514125 324 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 RNU6-107P-201ENST00000516643 102 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 Y_RNA.706-201ENST00000516933 99 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AC109635.3-201ENST00000529536 185 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AP002001.1-203ENST00000534002 267 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AC136932.1-201ENST00000574771 208 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AC005899.2-201ENST00000584353 90 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AC068790.6-201ENST00000602558 258 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AC018462.2-201ENST00000605375 395 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.48□□□□□ -2.33
COL4A1P02462 AC093913.1-201ENST00000614178 329 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AC092794.2-201ENST00000620933 563 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 AC073869.6-201ENST00000640656 341 ntBASIC0.48□□□□□ -2.33
COL4A1P02462 Y_RNA.184-201ENST00000363884 108 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 RNU6-1215P-201ENST00000384441 102 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 AL034345.1-201ENST00000407768 123 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 RNU6-733P-201ENST00000410759 104 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.47□□□□□ -2.33
COL4A1P02462 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms