Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-625P-201ENST00000459412 107 ntBASIC1.01□□□□□ -2.25
CTDNEP1O95476 RPS23P4-201ENST00000487908 423 ntBASIC1.01□□□□□ -2.25
CTDNEP1O95476 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.01□□□□□ -2.25
CTDNEP1O95476 AC010598.1-201ENST00000510378 103 ntBASIC1.01□□□□□ -2.25
CTDNEP1O95476 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.01□□□□□ -2.25
CTDNEP1O95476 RNU7-99P-201ENST00000516271 62 ntBASIC1.01□□□□□ -2.25
CTDNEP1O95476 RNU6-966P-201ENST00000516479 104 ntBASIC1.01□□□□□ -2.25
CTDNEP1O95476 RNU6-699P-201ENST00000517081 110 ntBASIC1.01□□□□□ -2.25
CTDNEP1O95476 AL137100.2-201ENST00000555786 315 ntBASIC1.01□□□□□ -2.25
CTDNEP1O95476 MIR548S-201ENST00000581352 82 ntBASIC1.01□□□□□ -2.25
CTDNEP1O95476 AC021506.2-201ENST00000612354 169 ntBASIC1.01□□□□□ -2.25
CTDNEP1O95476 U6.115-201ENST00000636045 103 ntBASIC1.01□□□□□ -2.25
CTDNEP1O95476 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CTDNEP1O95476 RNU6-1266P-201ENST00000362794 105 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 Y_RNA.58-201ENST00000362807 102 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 Y_RNA.154-201ENST00000363624 102 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 Y_RNA.259-201ENST00000364619 101 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 Y_RNA.263-201ENST00000364659 114 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 RNY3P1-201ENST00000365085 102 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 RNY3-201ENST00000365484 102 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 RNU6-926P-201ENST00000384075 107 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 SNORA70.7-201ENST00000384159 133 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 Y_RNA.463-201ENST00000384271 102 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 Y_RNA.498-201ENST00000384460 102 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 AF228730.4-201ENST00000421457 183 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 MRPL35P3-201ENST00000421557 364 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
CTDNEP1O95476 MTND5P20-201ENST00000448677 143 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 RNU7-152P-201ENST00000458982 64 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 SNORD19B-201ENST00000459623 84 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 RPS27P22-201ENST00000478056 241 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 AC097462.1-201ENST00000514125 324 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 RNU6-408P-201ENST00000515910 100 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 CYCSP23-201ENST00000519781 313 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1□□□□□ -2.25
CTDNEP1O95476 MIR4709-201ENST00000577272 72 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1□□□□□ -2.25
CTDNEP1O95476 AC005828.6-201ENST00000606610 232 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 AC104985.2-201ENST00000620598 500 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 MIR8054-201ENST00000620877 86 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 MIR3674-201ENST00000636576 68 ntBASIC1□□□□□ -2.25
CTDNEP1O95476 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1□□□□□ -2.25
CTDNEP1O95476 SNORA27.1-201ENST00000362604 124 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 Y_RNA.70-201ENST00000362886 110 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 RNU6-1040P-201ENST00000383974 107 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 RNU6-1031P-201ENST00000384773 107 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 MIR625-201ENST00000385047 85 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 AC018865.2-201ENST00000423631 129 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 AC245047.3-201ENST00000429428 127 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 RNU7-34P-201ENST00000459394 64 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 AL117351.2-201ENST00000513571 157 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 RNU6-264P-201ENST00000517134 104 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 MIR2355-201ENST00000517199 87 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.99□□□□□ -2.25
CTDNEP1O95476 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.99□□□□□ -2.25
CTDNEP1O95476 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.99□□□□□ -2.25
CTDNEP1O95476 MIR3937-201ENST00000580135 106 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.99□□□□□ -2.25
CTDNEP1O95476 AC011476.5-201ENST00000615594 130 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 AC091925.1-201ENST00000623204 462 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 AC006435.5-201ENST00000624486 112 ntBASIC0.99□□□□□ -2.25
CTDNEP1O95476 RNU6-1115P-201ENST00000362490 106 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 Y_RNA.101-201ENST00000363154 102 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 Y_RNA.314-201ENST00000365114 102 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 Y_RNA.356-201ENST00000365475 113 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 Y_RNA.361-201ENST00000365515 120 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 Y_RNA.384-201ENST00000383909 102 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 RNU6-440P-201ENST00000390882 105 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 COX6CP10-201ENST00000416832 224 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 RNA5SP20-201ENST00000515976 84 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 Y_RNA.702-201ENST00000516843 96 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 AC019176.1-201ENST00000518519 225 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 AC023442.1-201ENST00000531247 422 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.98□□□□□ -2.25
CTDNEP1O95476 AC018630.2-201ENST00000534866 2403 ntBASIC0.98□□□□□ -2.25
CTDNEP1O95476 RNU6-490P-201ENST00000362985 107 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 Y_RNA.243-201ENST00000364481 109 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU6-407P-201ENST00000365280 104 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU6-117P-201ENST00000365415 107 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNY3P4-201ENST00000384428 101 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 MIR222-201ENST00000384992 110 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU6-1009P-201ENST00000390996 107 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 MRPL42P3-201ENST00000401492 326 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 MRPL35P1-201ENST00000404272 572 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU6-1199P-201ENST00000411249 104 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.97□□□□□ -2.25
CTDNEP1O95476 MTATP6P23-201ENST00000440153 476 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 AC093019.1-201ENST00000443135 252 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 AL137792.2-201ENST00000443484 235 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 AC091021.1-201ENST00000468051 388 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 Y_RNA.676-201ENST00000516393 96 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU7-40P-201ENST00000516397 64 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU6-1012P-201ENST00000516606 109 ntBASIC0.97□□□□□ -2.25
CTDNEP1O95476 RNU6-63P-201ENST00000516690 95 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms