Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.67□□□□□ -2.14
MBD4O95243 AC091021.1-201ENST00000468051 388 ntBASIC1.67□□□□□ -2.14
MBD4O95243 RNU6-1012P-201ENST00000516606 109 ntBASIC1.67□□□□□ -2.14
MBD4O95243 RNU7-28P-201ENST00000516759 62 ntBASIC1.67□□□□□ -2.14
MBD4O95243 RNU2-56P-201ENST00000516826 190 ntBASIC1.67□□□□□ -2.14
MBD4O95243 SNORD116.3-201ENST00000517176 78 ntBASIC1.67□□□□□ -2.14
MBD4O95243 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.67□□□□□ -2.14
MBD4O95243 AC138305.3-201ENST00000624988 240 ntBASIC1.67□□□□□ -2.14
MBD4O95243 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
MBD4O95243 Y_RNA.361-201ENST00000365515 120 ntBASIC1.66□□□□□ -2.14
MBD4O95243 MIR520G-201ENST00000385064 90 ntBASIC1.66□□□□□ -2.14
MBD4O95243 RPL23AP36-201ENST00000413895 458 ntBASIC1.66□□□□□ -2.14
MBD4O95243 RNU2-12P-201ENST00000517216 168 ntBASIC1.66□□□□□ -2.14
MBD4O95243 AP002004.2-201ENST00000531656 154 ntBASIC1.66□□□□□ -2.14
MBD4O95243 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.66□□□□□ -2.14
MBD4O95243 AC091178.2-201ENST00000584401 117 ntBASIC1.66□□□□□ -2.14
MBD4O95243 AL365434.2-201ENST00000607979 234 ntBASIC1.66□□□□□ -2.14
MBD4O95243 SNORA7.1-201ENST00000363750 139 ntBASIC1.65□□□□□ -2.15
MBD4O95243 SNORD115-30-201ENST00000364117 82 ntBASIC1.65□□□□□ -2.15
MBD4O95243 Y_RNA.265-201ENST00000364677 108 ntBASIC1.65□□□□□ -2.15
MBD4O95243 RNU6-117P-201ENST00000365415 107 ntBASIC1.65□□□□□ -2.15
MBD4O95243 AC108729.3-201ENST00000513484 108 ntBASIC1.65□□□□□ -2.15
MBD4O95243 RNU6-507P-201ENST00000516045 100 ntBASIC1.65□□□□□ -2.15
MBD4O95243 RNA5SP61-201ENST00000516453 100 ntBASIC1.65□□□□□ -2.15
MBD4O95243 SUMO2P16-201ENST00000519475 264 ntBASIC1.65□□□□□ -2.15
MBD4O95243 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.65□□□□□ -2.15
MBD4O95243 AP001094.1-201ENST00000579805 193 ntBASIC1.65□□□□□ -2.15
MBD4O95243 AC005176.2-201ENST00000596933 147 ntBASIC1.65□□□□□ -2.15
MBD4O95243 AL078604.3-201ENST00000615580 211 ntBASIC1.65□□□□□ -2.15
MBD4O95243 AL138825.1-201ENST00000618587 192 ntBASIC1.65□□□□□ -2.15
MBD4O95243 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.65□□□□□ -2.15
MBD4O95243 Y_RNA.124-201ENST00000363339 93 ntBASIC1.64□□□□□ -2.15
MBD4O95243 Y_RNA.267-201ENST00000364679 109 ntBASIC1.64□□□□□ -2.15
MBD4O95243 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.64□□□□□ -2.15
MBD4O95243 RNY3P14-201ENST00000384309 102 ntBASIC1.64□□□□□ -2.15
MBD4O95243 MT-TD-201ENST00000387419 68 ntBASIC1.64□□□□□ -2.15
MBD4O95243 SNORA12.1-201ENST00000390873 148 ntBASIC1.64□□□□□ -2.15
MBD4O95243 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.64□□□□□ -2.15
MBD4O95243 RNU2-54P-201ENST00000410299 190 ntBASIC1.64□□□□□ -2.15
MBD4O95243 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.64□□□□□ -2.15
MBD4O95243 RNU1-98P-201ENST00000458992 160 ntBASIC1.64□□□□□ -2.15
MBD4O95243 AC006600.1-201ENST00000572529 153 ntBASIC1.64□□□□□ -2.15
MBD4O95243 PRR13P7-201ENST00000605538 430 ntBASIC1.64□□□□□ -2.15
MBD4O95243 SNORD3E-202ENST00000627253 216 ntBASIC1.64□□□□□ -2.15
MBD4O95243 RNU6-1115P-201ENST00000362490 106 ntBASIC1.63□□□□□ -2.15
MBD4O95243 MIR660-201ENST00000385235 97 ntBASIC1.63□□□□□ -2.15
MBD4O95243 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.63□□□□□ -2.15
MBD4O95243 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.63□□□□□ -2.15
MBD4O95243 AC093027.1-201ENST00000546698 429 ntBASIC1.63□□□□□ -2.15
MBD4O95243 MIR4659A-201ENST00000580269 81 ntBASIC1.63□□□□□ -2.15
MBD4O95243 AC240442.1-201ENST00000616055 283 ntBASIC1.63□□□□□ -2.15
MBD4O95243 MIR4272-201ENST00000635924 64 ntBASIC1.63□□□□□ -2.15
MBD4O95243 RNU5A-5P-201ENST00000411054 116 ntBASIC1.62□□□□□ -2.15
MBD4O95243 SDAD1P3-201ENST00000427380 333 ntBASIC1.62□□□□□ -2.15
MBD4O95243 AC096644.2-201ENST00000429278 159 ntBASIC1.62□□□□□ -2.15
MBD4O95243 AL135790.2-201ENST00000437701 267 ntBASIC1.62□□□□□ -2.15
MBD4O95243 HSPE1P13-201ENST00000451143 297 ntBASIC1.62□□□□□ -2.15
MBD4O95243 RPL30P7-201ENST00000479312 323 ntBASIC1.62□□□□□ -2.15
MBD4O95243 AC004223.1-201ENST00000479840 271 ntBASIC1.62□□□□□ -2.15
MBD4O95243 AL163540.1-201ENST00000485382 386 ntBASIC1.62□□□□□ -2.15
MBD4O95243 MTND3P22-201ENST00000510932 243 ntBASIC1.62□□□□□ -2.15
MBD4O95243 RNU6-976P-201ENST00000516086 111 ntBASIC1.62□□□□□ -2.15
MBD4O95243 AL358944.1-201ENST00000528537 144 ntBASIC1.62□□□□□ -2.15
MBD4O95243 RAB11AP2-201ENST00000545905 639 ntBASIC1.62□□□□□ -2.15
MBD4O95243 AC055872.1-201ENST00000570978 278 ntBASIC1.62□□□□□ -2.15
MBD4O95243 U6.92-201ENST00000636464 89 ntBASIC1.62□□□□□ -2.15
MBD4O95243 AC112487.2-201ENST00000637950 304 ntBASIC1.62□□□□□ -2.15
MBD4O95243 RNU6-626P-201ENST00000363354 107 ntBASIC1.61□□□□□ -2.15
MBD4O95243 Y_RNA.230-201ENST00000364348 109 ntBASIC1.61□□□□□ -2.15
MBD4O95243 RNU1-115P-201ENST00000365329 160 ntBASIC1.61□□□□□ -2.15
MBD4O95243 RNU6-20P-201ENST00000384106 107 ntBASIC1.61□□□□□ -2.15
MBD4O95243 RNU6-505P-201ENST00000384427 107 ntBASIC1.61□□□□□ -2.15
MBD4O95243 RNA5SP482-201ENST00000391269 118 ntBASIC1.61□□□□□ -2.15
MBD4O95243 RPL30P13-201ENST00000418873 348 ntBASIC1.61□□□□□ -2.15
MBD4O95243 RNU1-123P-201ENST00000458950 160 ntBASIC1.61□□□□□ -2.15
MBD4O95243 RPL39P38-201ENST00000467018 153 ntBASIC1.61□□□□□ -2.15
MBD4O95243 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.61□□□□□ -2.15
MBD4O95243 AL117351.2-201ENST00000513571 157 ntBASIC1.61□□□□□ -2.15
MBD4O95243 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.61□□□□□ -2.15
MBD4O95243 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.61□□□□□ -2.15
MBD4O95243 Y_RNA.804-201ENST00000615262 101 ntBASIC1.61□□□□□ -2.15
MBD4O95243 AC091925.1-201ENST00000623204 462 ntBASIC1.61□□□□□ -2.15
MBD4O95243 SNORA1B-201ENST00000362535 133 ntBASIC1.6□□□□□ -2.15
MBD4O95243 Y_RNA.39-201ENST00000362620 98 ntBASIC1.6□□□□□ -2.15
MBD4O95243 Y_RNA.252-201ENST00000364556 101 ntBASIC1.6□□□□□ -2.15
MBD4O95243 AL031003.1-201ENST00000404229 172 ntBASIC1.6□□□□□ -2.15
MBD4O95243 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.6□□□□□ -2.15
MBD4O95243 RPS29P23-201ENST00000458635 123 ntBASIC1.6□□□□□ -2.15
MBD4O95243 RNU6-1291P-201ENST00000516591 104 ntBASIC1.6□□□□□ -2.15
MBD4O95243 AL512310.8-201ENST00000550183 120 ntBASIC1.6□□□□□ -2.15
MBD4O95243 AL359821.1-201ENST00000605519 182 ntBASIC1.6□□□□□ -2.15
MBD4O95243 AL157834.3-201ENST00000615543 103 ntBASIC1.6□□□□□ -2.15
MBD4O95243 AC011476.5-201ENST00000615594 130 ntBASIC1.6□□□□□ -2.15
MBD4O95243 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
MBD4O95243 AL391987.6-201ENST00000305671 199 ntBASIC1.59□□□□□ -2.15
MBD4O95243 Y_RNA.101-201ENST00000363154 102 ntBASIC1.59□□□□□ -2.15
MBD4O95243 RNU4-76P-201ENST00000364509 141 ntBASIC1.59□□□□□ -2.15
MBD4O95243 SNORD26-201ENST00000384147 75 ntBASIC1.59□□□□□ -2.15
MBD4O95243 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.59□□□□□ -2.15
MBD4O95243 CHEK2P4-201ENST00000450340 246 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 237.8 ms