Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SEPT7P4-201ENST00000437076 306 ntBASIC2.23□□□□□ -2.05
SMAD6O43541 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SMAD6O43541 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.23□□□□□ -2.05
SMAD6O43541 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
SMAD6O43541 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.23□□□□□ -2.05
SMAD6O43541 MIR4765-201ENST00000585007 77 ntBASIC2.23□□□□□ -2.05
SMAD6O43541 AP001485.1-201ENST00000604799 199 ntBASIC2.23□□□□□ -2.05
SMAD6O43541 uc_338.14-201ENST00000613162 166 ntBASIC2.23□□□□□ -2.05
SMAD6O43541 AL078604.3-201ENST00000615580 211 ntBASIC2.23□□□□□ -2.05
SMAD6O43541 AC009831.4-201ENST00000620744 325 ntBASIC2.23□□□□□ -2.05
SMAD6O43541 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SMAD6O43541 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMAD6O43541 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMAD6O43541 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMAD6O43541 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SMAD6O43541 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.22□□□□□ -2.05
SMAD6O43541 Y_RNA.23-201ENST00000362496 106 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 Y_RNA.75-201ENST00000362927 97 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 Y_RNA.121-201ENST00000363309 113 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 U3.8-201ENST00000363675 217 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 RNU4-10P-201ENST00000364383 140 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 RNU6-449P-201ENST00000383914 107 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 MIR17-201ENST00000385012 84 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 RNU6-381P-201ENST00000391259 108 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 AL023284.1-201ENST00000403956 276 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 RN7SKP192-201ENST00000411291 327 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 AC003685.2-201ENST00000422795 395 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 RPL30P4-201ENST00000429309 333 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.22□□□□□ -2.05
SMAD6O43541 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.22□□□□□ -2.05
SMAD6O43541 MIR4648-201ENST00000580107 72 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 AC007229.1-201ENST00000590455 412 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.22□□□□□ -2.05
SMAD6O43541 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 AC013791.1-201ENST00000616619 62 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 AC008873.1-201ENST00000625051 138 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 MTND1P7-201ENST00000632801 297 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 U6.115-201ENST00000636045 103 ntBASIC2.22□□□□□ -2.05
SMAD6O43541 AC009487.4-201ENST00000624969 3585 ntBASIC2.21□□□□□ -2.05
SMAD6O43541 RNU4-84P-201ENST00000364200 139 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 RNU6-1305P-201ENST00000364353 104 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 RNU6-312P-201ENST00000364629 107 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 RNU6-818P-201ENST00000364837 108 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 Y_RNA.287-201ENST00000364853 94 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 RNU6-81P-201ENST00000365608 104 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 SNORA72.4-201ENST00000384174 132 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 U6atac.2-201ENST00000408644 118 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 MIR1261-201ENST00000408659 82 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 RNU6-855P-201ENST00000410395 104 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 AC097463.2-201ENST00000421074 142 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 RPS20P10-201ENST00000451209 253 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 U4atac.1-201ENST00000618345 95 ntBASIC2.21□□□□□ -2.06
SMAD6O43541 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
SMAD6O43541 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SMAD6O43541 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.21□□□□□ -2.06
SMAD6O43541 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.2□□□□□ -2.06
SMAD6O43541 RNU6-486P-201ENST00000363116 107 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 snoU2_19.4-201ENST00000364329 80 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 SNORD32B-201ENST00000364460 84 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 SNORA16B-201ENST00000364674 135 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 RNU6-275P-201ENST00000364910 107 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 Y_RNA.361-201ENST00000365515 120 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 Y_RNA.572-201ENST00000384757 98 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 RNU6-131P-201ENST00000391144 107 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 SNORA11.4-201ENST00000408823 129 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 MTATP6P29-201ENST00000415057 132 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
SMAD6O43541 Y_RNA.797-201ENST00000515977 94 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 SCARNA16.3-201ENST00000516595 184 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.2□□□□□ -2.06
SMAD6O43541 MIR548AI-201ENST00000579940 88 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 RPL30P11-203ENST00000598995 310 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 AL713866.2-201ENST00000603579 219 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 AL670379.2-201ENST00000604983 252 ntBASIC2.2□□□□□ -2.06
SMAD6O43541 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.2□□□□□ -2.06
SMAD6O43541 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SMAD6O43541 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SMAD6O43541 Y_RNA.293-201ENST00000364908 93 ntBASIC2.19□□□□□ -2.06
SMAD6O43541 Y_RNA.310-201ENST00000365063 113 ntBASIC2.19□□□□□ -2.06
SMAD6O43541 Y_RNA.357-201ENST00000365487 109 ntBASIC2.19□□□□□ -2.06
SMAD6O43541 Y_RNA.368-201ENST00000365547 113 ntBASIC2.19□□□□□ -2.06
SMAD6O43541 Y_RNA.400-201ENST00000383963 111 ntBASIC2.19□□□□□ -2.06
SMAD6O43541 RNU6-710P-201ENST00000410424 105 ntBASIC2.19□□□□□ -2.06
SMAD6O43541 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.19□□□□□ -2.06
SMAD6O43541 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.19□□□□□ -2.06
SMAD6O43541 RNA5SP112-201ENST00000515937 99 ntBASIC2.19□□□□□ -2.06
SMAD6O43541 SNORD116-25-201ENST00000516517 92 ntBASIC2.19□□□□□ -2.06
SMAD6O43541 RNU6-1098P-201ENST00000516772 96 ntBASIC2.19□□□□□ -2.06
SMAD6O43541 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.19□□□□□ -2.06
SMAD6O43541 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SMAD6O43541 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SMAD6O43541 Y_RNA.341-201ENST00000365341 102 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 Y_RNA.343-201ENST00000365354 112 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 Y_RNA.488-201ENST00000384403 102 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 Y_RNA.497-201ENST00000384447 98 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms