Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 MTND4P7-201ENST00000523876 130 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.45□□□□□ -2.48
HMGB3O15347 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.45□□□□□ -2.48
HMGB3O15347 UBL5P4-201ENST00000562584 236 ntBASIC-0.45□□□□□ -2.48
HMGB3O15347 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.45□□□□□ -2.48
HMGB3O15347 RNU6-181P-201ENST00000363225 107 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 RNA5SP325-201ENST00000363756 130 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 RNU6-929P-201ENST00000384429 107 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 RNU2-9P-201ENST00000410194 145 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.46□□□□□ -2.48
HMGB3O15347 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.46□□□□□ -2.48
HMGB3O15347 AC005042.3-201ENST00000453230 174 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 RNU6-848P-201ENST00000515948 107 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 RNU6-617P-201ENST00000516147 107 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 RNU6-473P-201ENST00000516164 107 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 RNU6-107P-201ENST00000516643 102 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 RNU6-445P-201ENST00000516949 107 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 AC011712.1-201ENST00000588959 234 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 AC010525.2-201ENST00000590920 195 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 AC103705.1-201ENST00000619013 241 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.46□□□□□ -2.48
HMGB3O15347 RNU6-756P-201ENST00000383997 107 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 RNU6-136P-201ENST00000384663 107 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 MIR643-201ENST00000385267 97 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 AC133104.1-201ENST00000429100 218 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 SUMO1P2-201ENST00000452524 304 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 AC104692.1-201ENST00000472406 90 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 RNU6-189P-201ENST00000516120 101 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.47□□□□□ -2.48
HMGB3O15347 MIR4424-201ENST00000585257 86 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 AC008608.1-201ENST00000603910 127 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 AL391834.2-201ENST00000609982 546 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 AC016597.2-201ENST00000613256 341 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 AC098679.4-201ENST00000624241 654 ntBASIC-0.47□□□□□ -2.48
HMGB3O15347 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 RNY1-201ENST00000364228 113 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 RNU6-541P-201ENST00000384709 110 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 MIR522-201ENST00000385071 87 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 MIR513B-201ENST00000385136 84 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
HMGB3O15347 RNU6-205P-201ENST00000390858 107 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 MIR873-201ENST00000401120 77 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 MIR1287-201ENST00000408492 90 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 Z99497.1-201ENST00000421282 135 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 AL009048.1-201ENST00000450437 298 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 AL033528.1-201ENST00000453780 140 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 AP000753.3-201ENST00000604083 169 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 AL133215.3-201ENST00000609801 448 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 TUSC7.1-201ENST00000610969 165 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.48□□□□□ -2.49
HMGB3O15347 SNORA72.1-201ENST00000363485 129 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 RNU6-82P-201ENST00000363970 107 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 RNU6-933P-201ENST00000384424 107 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 RNY3P9-201ENST00000384727 106 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 MIR892B-201ENST00000401279 77 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 AC069271.1-201ENST00000445577 156 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.49□□□□□ -2.49
HMGB3O15347 SCARNA8-201ENST00000515924 131 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.49□□□□□ -2.49
HMGB3O15347 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.49□□□□□ -2.49
HMGB3O15347 AC100830.2-201ENST00000581636 240 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 MIR4264-201ENST00000583520 66 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 MIR5692C1-201ENST00000585309 91 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 AC005828.6-201ENST00000606610 232 ntBASIC-0.49□□□□□ -2.49
HMGB3O15347 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 SNORA40.3-201ENST00000390964 122 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 AL354751.2-201ENST00000415471 210 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 MLLT10P1-201ENST00000418346 262 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 MTCYBP8-201ENST00000422855 651 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 BTF3P11-201ENST00000426582 477 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 MTCO2P16-201ENST00000436962 677 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 HMGN2P32-201ENST00000444648 269 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 RNU4-49P-201ENST00000516080 140 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 AP003461.1-201ENST00000528866 78 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 AC133485.4-201ENST00000561835 220 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.5□□□□□ -2.49
HMGB3O15347 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.5□□□□□ -2.49
HMGB3O15347 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 SNORD114-7-201ENST00000362520 77 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 RNA5SP117-201ENST00000365294 118 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 RNU6-925P-201ENST00000384629 104 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 RNU6-747P-201ENST00000390928 104 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 RNU6-241P-201ENST00000391148 104 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 RPL30P16-201ENST00000419341 429 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.51□□□□□ -2.49
HMGB3O15347 TPTE2P5-203ENST00000458118 728 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 RNU7-102P-201ENST00000458948 62 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.51□□□□□ -2.49
HMGB3O15347 AC046134.1-201ENST00000514454 666 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.51□□□□□ -2.49
HMGB3O15347 AC011458.1-201ENST00000604034 617 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 AL357078.3-201ENST00000607528 618 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 AC107308.1-201ENST00000615897 301 ntBASIC-0.51□□□□□ -2.49
HMGB3O15347 AC067863.3-201ENST00000624172 122 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms