Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TRMT112P2-201ENST00000512910 132 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 RNU6-1291P-201ENST00000516591 104 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC188H7C350 AP002001.1-203ENST00000534002 267 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 MIR548S-201ENST00000581352 82 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 AL132765.2-201ENST00000610812 351 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 AC106754.2-201ENST00000623006 233 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 AC127459.3-201ENST00000624328 466 ntBASIC1.41□□□□□ -2.18
CCDC188H7C350 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC188H7C350 MIR410-201ENST00000362222 80 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 Y_RNA.124-201ENST00000363339 93 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 RNU6-454P-201ENST00000364292 107 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 SNORA25.9-201ENST00000365087 128 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 RNU6-136P-201ENST00000384663 107 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 Y_RNA.621-201ENST00000411065 96 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC188H7C350 AC005840.1-201ENST00000498412 377 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 Y_RNA.661-201ENST00000516003 99 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 SNORA70.12-201ENST00000516084 153 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 RNU6-277P-201ENST00000516272 106 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 MIR4778-201ENST00000577635 80 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 AC005176.2-201ENST00000596933 147 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 AC004467.1-201ENST00000615678 330 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 AL513423.1-201ENST00000621695 132 ntBASIC1.4□□□□□ -2.19
CCDC188H7C350 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC188H7C350 Y_RNA.116-201ENST00000363292 103 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 RNY3P4-201ENST00000384428 101 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 AC236972.2-201ENST00000434979 310 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 AL137792.2-201ENST00000443484 235 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 ELOCP24-201ENST00000456370 334 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 AC091951.2-201ENST00000500762 203 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 RN7SKP88-201ENST00000516847 250 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 RNU6-699P-201ENST00000517081 110 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 Y_RNA.718-201ENST00000517110 102 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC188H7C350 AP002004.2-201ENST00000531656 154 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 AC015720.1-201ENST00000565251 277 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 AC006600.1-201ENST00000572529 153 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 7SK.8-201ENST00000612110 250 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 7SK.11-201ENST00000615477 250 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 7SK.13-201ENST00000622040 250 ntBASIC1.39□□□□□ -2.19
CCDC188H7C350 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CCDC188H7C350 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CCDC188H7C350 Y_RNA.70-201ENST00000362886 110 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 RNU6-961P-201ENST00000363893 105 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 RNU4-76P-201ENST00000364509 141 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 SNORD116-29-201ENST00000384516 83 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 MIR520G-201ENST00000385064 90 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 MTND5P20-201ENST00000448677 143 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 Y_RNA.632-201ENST00000459189 102 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 RNU6-63P-201ENST00000516690 95 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 Y_RNA.702-201ENST00000516843 96 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 RNU6-341P-201ENST00000516973 96 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 RNU6-1096P-201ENST00000517089 102 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 SNORD116.3-201ENST00000517176 78 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 AL390123.1-201ENST00000603216 237 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 PRR13P7-201ENST00000605538 430 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 AC011476.5-201ENST00000615594 130 ntBASIC1.38□□□□□ -2.19
CCDC188H7C350 Y_RNA.146-201ENST00000363549 102 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 MIR559-201ENST00000385188 96 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 MIR660-201ENST00000385235 97 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 RNU4-62P-201ENST00000410125 130 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 RPL30P7-201ENST00000479312 323 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 RNU6-155P-201ENST00000516347 100 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 RNU6-875P-201ENST00000516488 106 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 AL512310.8-201ENST00000550183 120 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 DNAJC19P9-201ENST00000555084 351 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 Y_RNA.804-201ENST00000615262 101 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 MIR8065-201ENST00000620577 100 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.37□□□□□ -2.19
CCDC188H7C350 AC091812.1-201ENST00000432235 1948 ntBASIC1.36□□□□□ -2.19
CCDC188H7C350 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
CCDC188H7C350 SNORA1B-201ENST00000362535 133 ntBASIC1.36□□□□□ -2.19
CCDC188H7C350 Y_RNA.118-201ENST00000363300 101 ntBASIC1.36□□□□□ -2.19
CCDC188H7C350 Y_RNA.303-201ENST00000364998 94 ntBASIC1.36□□□□□ -2.19
CCDC188H7C350 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC188H7C350 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC188H7C350 RNU6-922P-201ENST00000516753 99 ntBASIC1.36□□□□□ -2.19
CCDC188H7C350 RNU7-28P-201ENST00000516759 62 ntBASIC1.36□□□□□ -2.19
CCDC188H7C350 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC188H7C350 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
CCDC188H7C350 CYP3A52P-201ENST00000563326 91 ntBASIC1.36□□□□□ -2.19
CCDC188H7C350 MIR4659A-201ENST00000580269 81 ntBASIC1.36□□□□□ -2.19
CCDC188H7C350 RNU6-505P-201ENST00000384427 107 ntBASIC1.35□□□□□ -2.19
CCDC188H7C350 Y_RNA.529-201ENST00000384586 119 ntBASIC1.35□□□□□ -2.19
CCDC188H7C350 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC188H7C350 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC188H7C350 AC092991.1-201ENST00000477176 376 ntBASIC1.35□□□□□ -2.19
CCDC188H7C350 RNU6-507P-201ENST00000516045 100 ntBASIC1.35□□□□□ -2.19
CCDC188H7C350 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
CCDC188H7C350 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
CCDC188H7C350 VN1R91P-201ENST00000594377 169 ntBASIC1.35□□□□□ -2.19
CCDC188H7C350 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
CCDC188H7C350 AL512598.1-201ENST00000610158 273 ntBASIC1.35□□□□□ -2.19
CCDC188H7C350 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC188H7C350 Y_RNA.27-201ENST00000362540 103 ntBASIC1.34□□□□□ -2.19
CCDC188H7C350 Y_RNA.39-201ENST00000362620 98 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms