Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
COL6A5A8TX70 RNU6-905P-201ENST00000384434 107 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 MTND1P32-201ENST00000433043 938 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 MTATP6P26-201ENST00000445926 662 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 HMGN3P1-201ENST00000453847 193 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 RPS29P24-201ENST00000486345 171 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 C1DP5-201ENST00000525775 383 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 AC009994.1-201ENST00000606889 253 ntBASIC-1.01□□□□□ -2.57
COL6A5A8TX70 RNU6-534P-201ENST00000364877 106 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 AL451054.2-201ENST00000420896 202 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 RNU6-63P-201ENST00000516690 95 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 LRRC6P1-201ENST00000532188 885 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 SNORD115-40-201ENST00000606510 82 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
COL6A5A8TX70 RNA5SP26-201ENST00000362406 119 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 RNY3P4-201ENST00000384428 101 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 RNU6-101P-201ENST00000410323 104 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 BX276092.1-201ENST00000427368 251 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 snoU13.16-201ENST00000459350 104 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 GMFBP1-201ENST00000467831 427 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 MTND2P7-201ENST00000521337 640 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 MIR8068-201ENST00000618032 68 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 AC091304.10-201ENST00000641554 121 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 SNORD115-23-201ENST00000364461 82 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 SNORD115-35-201ENST00000365122 82 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.02□□□□□ -2.57
COL6A5A8TX70 RNU6-1183P-201ENST00000517054 60 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 AC091163.3-201ENST00000518269 1144 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 MIR4771-2-201ENST00000577758 74 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 MIR4771-1-201ENST00000582617 74 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 MIR3123-201ENST00000583417 75 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 AL355598.1-201ENST00000604169 202 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 SNORA70.25-201ENST00000612741 95 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.02□□□□□ -2.57
COL6A5A8TX70 RNU6-694P-201ENST00000364071 147 ntBASIC-1.03□□□□□ -2.57
COL6A5A8TX70 MCFD2P1-201ENST00000417812 300 ntBASIC-1.03□□□□□ -2.57
COL6A5A8TX70 AC092447.3-201ENST00000426027 686 ntBASIC-1.03□□□□□ -2.57
COL6A5A8TX70 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.03□□□□□ -2.57
COL6A5A8TX70 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.03□□□□□ -2.57
COL6A5A8TX70 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.03□□□□□ -2.57
COL6A5A8TX70 RNU6-703P-201ENST00000516946 107 ntBASIC-1.03□□□□□ -2.57
COL6A5A8TX70 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 RNU2-23P-201ENST00000410545 195 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 AC098592.1-201ENST00000419352 333 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 AL035461.1-201ENST00000421490 332 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 RNU7-102P-201ENST00000458948 62 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 AC010531.2-201ENST00000465012 153 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.03□□□□□ -2.58
COL6A5A8TX70 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.03□□□□□ -2.58
COL6A5A8TX70 AC023538.1-201ENST00000534576 736 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 AL096861.1-201ENST00000610899 123 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 AP003400.6-201ENST00000624698 740 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.03□□□□□ -2.58
COL6A5A8TX70 MIR376A2-201ENST00000636782 80 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 AL450472.1-202ENST00000637286 180 ntBASIC-1.03□□□□□ -2.58
COL6A5A8TX70 RNA5SP467-201ENST00000391274 118 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AC010486.3-201ENST00000511602 785 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 MIR544B-201ENST00000582372 78 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.04□□□□□ -2.58
COL6A5A8TX70 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 LARP1BP3-201ENST00000437229 869 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AL392103.1-201ENST00000447000 198 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.04□□□□□ -2.58
COL6A5A8TX70 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AC234772.3-201ENST00000602277 528 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AC018714.1-201ENST00000605028 208 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 AL354696.1-201ENST00000614652 497 ntBASIC-1.04□□□□□ -2.58
COL6A5A8TX70 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-1.04□□□□□ -2.58
COL6A5A8TX70 RNU6-746P-201ENST00000384112 109 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 MIR215-201ENST00000384858 110 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 MIR300-201ENST00000401138 83 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 RNU6-415P-201ENST00000516252 97 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.05□□□□□ -2.58
COL6A5A8TX70 MTND5P34-201ENST00000568888 325 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 SGO1P1-201ENST00000603525 1447 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 MIR340-201ENST00000362125 95 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 SNORD115-13-201ENST00000363358 82 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.05□□□□□ -2.58
COL6A5A8TX70 snoU13.10-201ENST00000459301 103 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.05□□□□□ -2.58
COL6A5A8TX70 AC104260.1-201ENST00000616660 539 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 AC097460.3-201ENST00000623099 442 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 AC006927.4-201ENST00000639187 543 ntBASIC-1.05□□□□□ -2.58
COL6A5A8TX70 RNU6-386P-201ENST00000362650 107 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 RNU6-613P-201ENST00000410412 108 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms