Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SNORD83B-201ENST00000386745 93 ntBASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 AL158053.1-201ENST00000441503 453 ntBASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 SCARNA17-201ENST00000516183 144 ntBASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 MTND1P5-201ENST00000517906 940 ntBASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 AC107934.1-201ENST00000522215 217 ntBASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 AC006441.5-201ENST00000612680 209 ntBASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 AC093726.3-201ENST00000637588 150 ntBASIC-1.02□□□□□ -2.57
CPSF4LA6NMK7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 RNU6-47P-201ENST00000383866 107 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 SNORA51.10-201ENST00000384418 136 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 SNRPGP10-201ENST00000432323 225 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 RNU6-475P-201ENST00000516073 104 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 RNU6-881P-201ENST00000516813 102 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 RNU6-323P-201ENST00000521915 107 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 AC123904.2-201ENST00000548059 300 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 AP001330.5-201ENST00000607176 411 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 AC091965.4-201ENST00000607691 587 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 MIR8084-201ENST00000614105 89 ntBASIC-1.03□□□□□ -2.57
CPSF4LA6NMK7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 SNORA22B-201ENST00000383876 138 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 RNU6-207P-201ENST00000384137 107 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 RNU6-376P-201ENST00000384731 106 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 AC114878.1-201ENST00000441166 358 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 SPINT5P-201ENST00000448174 155 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 AL138752.1-201ENST00000452964 351 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 RPL23AP75-201ENST00000491601 451 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 AC010598.1-201ENST00000510378 103 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 IGKV1-22-201ENST00000524313 326 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 AC010205.1-201ENST00000616668 449 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 AC022306.2-201ENST00000617563 647 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 AC005609.4-201ENST00000625071 447 ntBASIC-1.04□□□□□ -2.58
CPSF4LA6NMK7 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 RNU6-462P-201ENST00000362659 105 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 RNA5SP368-201ENST00000364298 116 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 RNU6-61P-201ENST00000365528 109 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 SNORA75.4-201ENST00000391278 119 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 MTND1P12-201ENST00000455231 147 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 AC021146.6-201ENST00000514659 117 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 RNU6-138P-201ENST00000515952 107 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 AC087685.1-201ENST00000587507 141 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 AC084368.1-201ENST00000620935 65 ntBASIC-1.05□□□□□ -2.58
CPSF4LA6NMK7 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 RNU6-726P-201ENST00000364680 107 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 RNU6-117P-201ENST00000365415 107 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 RNU6-609P-201ENST00000365459 107 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 RNA5SP494-201ENST00000410653 129 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 AC018865.2-201ENST00000423631 129 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 AC092447.3-201ENST00000426027 686 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 SCARNA18-201ENST00000459004 134 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 AC093303.1-201ENST00000514549 295 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 RNA5SP216-201ENST00000516111 123 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 AL157687.1-201ENST00000554853 619 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 AGGF1P4-201ENST00000568249 801 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 AC069431.2-201ENST00000604149 1099 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 AC023510.2-201ENST00000622162 746 ntBASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.06□□□□□ -2.58
CPSF4LA6NMK7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 RNU6-740P-201ENST00000364734 105 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 RNU6-354P-201ENST00000383862 107 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 RNU6-610P-201ENST00000384264 107 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 MIR487A-201ENST00000385009 80 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 MTCO2P6-201ENST00000463134 685 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 SNORD45.4-201ENST00000516629 73 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 SNORA27.4-201ENST00000516650 95 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 AC105029.1-201ENST00000520250 669 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 MTND4P33-201ENST00000556706 766 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 AP000811.1-201ENST00000603803 651 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 AL359999.1-201ENST00000604513 294 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 MIR4791-201ENST00000607666 84 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 AC245297.2-201ENST00000610119 565 ntBASIC-1.07□□□□□ -2.58
CPSF4LA6NMK7 SNORA20B-201ENST00000384220 132 ntBASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 RNU6-39P-201ENST00000384344 107 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms