Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC010608.3-201ENST00000625048 527 ntBASIC-1.32□□□□□ -2.62
RGPD3A6NKT7 AC073869.9-201ENST00000641610 120 ntBASIC-1.32□□□□□ -2.62
RGPD3A6NKT7 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.33□□□□□ -2.62
RGPD3A6NKT7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.33□□□□□ -2.62
RGPD3A6NKT7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.33□□□□□ -2.62
RGPD3A6NKT7 AL157687.1-201ENST00000554853 619 ntBASIC-1.33□□□□□ -2.62
RGPD3A6NKT7 MIR4789-201ENST00000577469 82 ntBASIC-1.33□□□□□ -2.62
RGPD3A6NKT7 OR4H6P-202ENST00000603819 340 ntBASIC-1.33□□□□□ -2.62
RGPD3A6NKT7 uc_338.10-201ENST00000621872 182 ntBASIC-1.33□□□□□ -2.62
RGPD3A6NKT7 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 RNU4-21P-201ENST00000362802 126 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 MIR570-201ENST00000384917 97 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 AC005178.1-201ENST00000508392 440 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 MTND3P25-201ENST00000509243 135 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 MTATP6P2-201ENST00000603319 678 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 MIR7844-201ENST00000616161 122 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 RNU5B-1-201ENST00000363286 116 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 MIR518F-201ENST00000384973 87 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 MIR15B-201ENST00000385045 98 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 RPS29P13-201ENST00000402041 169 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 RNU7-182P-201ENST00000459009 62 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 AC023442.1-201ENST00000531247 422 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 MIR548AC-201ENST00000585049 88 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 AC022960.3-201ENST00000619794 441 ntBASIC-1.34□□□□□ -2.62
RGPD3A6NKT7 SNORD38B-201ENST00000384690 67 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 SNORA26.5-201ENST00000391215 123 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 AC004866.1-201ENST00000411748 78 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 USP9YP16-201ENST00000430287 407 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 AC114878.1-201ENST00000441166 358 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 AC023632.1-201ENST00000518463 375 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 AC012414.2-201ENST00000559474 187 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 AC120024.3-201ENST00000603167 156 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 U4.2-201ENST00000618561 85 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 ZNF299P-201ENST00000406845 1804 ntBASIC-1.35□□□□□ -2.63
RGPD3A6NKT7 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 RNU6-481P-201ENST00000384194 107 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 SNAP23P1-201ENST00000433229 246 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 RNU6-158P-201ENST00000517104 100 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 AGGF1P4-201ENST00000568249 801 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 SNORA70.25-201ENST00000612741 95 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 RNU6-853P-201ENST00000364306 107 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 RNY3P13-201ENST00000365542 102 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 MTCO3P8-201ENST00000453691 755 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 AL358944.1-201ENST00000528537 144 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 MIR3912-201ENST00000577566 105 ntBASIC-1.36□□□□□ -2.63
RGPD3A6NKT7 RNU6-535P-201ENST00000384722 107 ntBASIC-1.37□□□□□ -2.63
RGPD3A6NKT7 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.37□□□□□ -2.63
RGPD3A6NKT7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.37□□□□□ -2.63
RGPD3A6NKT7 AC004386.2-201ENST00000441858 148 ntBASIC-1.37□□□□□ -2.63
RGPD3A6NKT7 SNORD123-201ENST00000459473 70 ntBASIC-1.37□□□□□ -2.63
RGPD3A6NKT7 RNU2-10P-201ENST00000516375 211 ntBASIC-1.37□□□□□ -2.63
RGPD3A6NKT7 RNU6-430P-201ENST00000517078 107 ntBASIC-1.37□□□□□ -2.63
RGPD3A6NKT7 AC109479.2-201ENST00000517842 174 ntBASIC-1.37□□□□□ -2.63
RGPD3A6NKT7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.37□□□□□ -2.63
RGPD3A6NKT7 MTND5P34-201ENST00000568888 325 ntBASIC-1.37□□□□□ -2.63
RGPD3A6NKT7 RNU6-509P-201ENST00000363519 107 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 RNU2-39P-201ENST00000410604 198 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 TIMM9P2-201ENST00000419324 266 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 AC092447.3-201ENST00000426027 686 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 AC021146.9-201ENST00000512503 156 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 RNA5SP216-201ENST00000516111 123 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 RNA5SP169-201ENST00000517268 117 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 AC026470.2-201ENST00000561492 181 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 AP000907.4-201ENST00000604143 237 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 AC069431.2-201ENST00000604149 1099 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 AC005562.2-201ENST00000618264 111 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 AC006435.5-201ENST00000624486 112 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 AL078596.1-201ENST00000624856 447 ntBASIC-1.38□□□□□ -2.63
RGPD3A6NKT7 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 MIR578-201ENST00000384828 96 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 MIR876-201ENST00000401147 81 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 MIR4762-201ENST00000585261 75 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 RNU6-137P-201ENST00000363680 108 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 SNORD65.1-201ENST00000390889 71 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 RNU6-607P-201ENST00000411283 108 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 AL390729.2-201ENST00000416137 156 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 BX276092.1-201ENST00000427368 251 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 SUMO1P3-201ENST00000439961 304 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 RNU7-62P-201ENST00000458856 62 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 snoU13.2-201ENST00000459201 104 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms