Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 snoU18.1-201ENST00000629629 71 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 RNU6-23P-201ENST00000363283 107 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 RNU6-200P-201ENST00000364743 107 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.374-201ENST00000365606 101 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 RNU6-763P-201ENST00000390865 106 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 RNU6-907P-201ENST00000390924 102 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 SNORA26.5-201ENST00000391215 123 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 RPS27P22-201ENST00000478056 241 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 RNA5SP385-201ENST00000515947 110 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 RNU7-128P-201ENST00000517247 62 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 AC005786.1-201ENST00000588553 154 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 AC004832.4-201ENST00000608952 331 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 AC022513.1-201ENST00000624512 117 ntBASIC2.87□□□□□ -1.95
CCDC85CA6NKD9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.172-201ENST00000363765 102 ntBASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.292-201ENST00000364904 97 ntBASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 HMGN2P39-201ENST00000398005 273 ntBASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 AL355497.1-201ENST00000406262 551 ntBASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 MIR1283-2-201ENST00000408621 87 ntBASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 RNU6-1278P-201ENST00000516130 107 ntBASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 MIR4506-201ENST00000584693 77 ntBASIC2.86□□□□□ -1.95
CCDC85CA6NKD9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.200-201ENST00000364018 102 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.304-201ENST00000365011 112 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 RNU6-1323P-201ENST00000384025 107 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 RNU6-211P-201ENST00000384047 107 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 SNORD116-13-201ENST00000384408 92 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 RNA5SP465-201ENST00000391195 109 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 BTF3P11-201ENST00000426582 477 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 AC018634.1-201ENST00000437554 401 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 AC104332.1-201ENST00000440471 797 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 RN7SL633P-201ENST00000488974 297 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 RNU7-99P-201ENST00000516271 62 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.679-201ENST00000516416 91 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 AC027419.1-201ENST00000522976 328 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 AC007229.1-201ENST00000590455 412 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 AC013791.1-201ENST00000616619 62 ntBASIC2.85□□□□□ -1.95
CCDC85CA6NKD9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 RNU6-417P-201ENST00000384712 107 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 MIR518A2-201ENST00000384966 87 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 MIR1298-201ENST00000408783 112 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 CYCSP49-201ENST00000420810 319 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 AL162725.1-201ENST00000435405 301 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 SNORD116-28-201ENST00000516123 91 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 AC024995.1-201ENST00000523014 93 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 AC021269.2-201ENST00000532318 330 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 AC130289.1-201ENST00000577321 73 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 SNORD14A-201ENST00000606526 91 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 AC103810.6-201ENST00000606708 136 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 AL359075.3-201ENST00000613288 217 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 U6.108-201ENST00000637764 58 ntBASIC2.84□□□□□ -1.95
CCDC85CA6NKD9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.96
CCDC85CA6NKD9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
CCDC85CA6NKD9 RNU6-899P-201ENST00000363947 107 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 Y_RNA.785-201ENST00000384290 109 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 RNU11-5P-201ENST00000391216 129 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 RPL32P35-201ENST00000415214 394 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 EBAG9P1-201ENST00000418955 543 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 BX510359.4-201ENST00000423750 193 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 RPS26P45-201ENST00000471748 340 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 SNORA64.4-201ENST00000516632 81 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 RNU7-172P-201ENST00000517125 64 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 AP005660.1-201ENST00000522972 293 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 AP003357.1-201ENST00000604497 148 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 AC005972.2-201ENST00000604690 348 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 MIR6779-201ENST00000617283 64 ntBASIC2.83□□□□□ -1.96
CCDC85CA6NKD9 U8.9-201ENST00000365667 134 ntBASIC2.82□□□□□ -1.96
CCDC85CA6NKD9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC85CA6NKD9 RNU7-141P-201ENST00000459304 62 ntBASIC2.82□□□□□ -1.96
CCDC85CA6NKD9 AC021205.2-201ENST00000480069 347 ntBASIC2.82□□□□□ -1.96
CCDC85CA6NKD9 AC010409.1-201ENST00000487382 476 ntBASIC2.82□□□□□ -1.96
CCDC85CA6NKD9 RNU6-138P-201ENST00000515952 107 ntBASIC2.82□□□□□ -1.96
CCDC85CA6NKD9 RNU7-116P-201ENST00000516940 62 ntBASIC2.82□□□□□ -1.96
CCDC85CA6NKD9 AC015720.1-201ENST00000565251 277 ntBASIC2.82□□□□□ -1.96
CCDC85CA6NKD9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC85CA6NKD9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC85CA6NKD9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC85CA6NKD9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC85CA6NKD9 Y_RNA.626-201ENST00000411288 95 ntBASIC2.81□□□□□ -1.96
CCDC85CA6NKD9 AC099677.2-201ENST00000436385 175 ntBASIC2.81□□□□□ -1.96
CCDC85CA6NKD9 U8.19-201ENST00000459095 133 ntBASIC2.81□□□□□ -1.96
CCDC85CA6NKD9 RNA5SP217-201ENST00000515959 91 ntBASIC2.81□□□□□ -1.96
CCDC85CA6NKD9 RNU7-115P-201ENST00000516433 55 ntBASIC2.81□□□□□ -1.96
CCDC85CA6NKD9 AC068657.1-201ENST00000520807 306 ntBASIC2.81□□□□□ -1.96
CCDC85CA6NKD9 MIR5692C2-201ENST00000577959 77 ntBASIC2.81□□□□□ -1.96
CCDC85CA6NKD9 SNORD115-3-201ENST00000363100 82 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms