Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SNORD28B-201ENST00000390993 75 ntBASIC-2.14□□□□□ -2.75
LINC01549A6NIU2 AL358934.1-201ENST00000432346 324 ntBASIC-2.14□□□□□ -2.75
LINC01549A6NIU2 AC091959.1-201ENST00000495857 238 ntBASIC-2.14□□□□□ -2.75
LINC01549A6NIU2 AC011458.1-201ENST00000604034 617 ntBASIC-2.14□□□□□ -2.75
LINC01549A6NIU2 Y_RNA.100-201ENST00000363141 102 ntBASIC-2.15□□□□□ -2.75
LINC01549A6NIU2 RNU6-353P-201ENST00000364266 108 ntBASIC-2.15□□□□□ -2.75
LINC01549A6NIU2 SSR1P2-201ENST00000415208 787 ntBASIC-2.15□□□□□ -2.75
LINC01549A6NIU2 AL031274.1-201ENST00000450334 232 ntBASIC-2.15□□□□□ -2.75
LINC01549A6NIU2 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-2.15□□□□□ -2.75
LINC01549A6NIU2 SLC2A13P1-201ENST00000531560 322 ntBASIC-2.15□□□□□ -2.75
LINC01549A6NIU2 DEFB131E-202ENST00000602581 683 ntBASIC-2.15□□□□□ -2.75
LINC01549A6NIU2 MIR6740-201ENST00000618268 113 ntBASIC-2.15□□□□□ -2.75
LINC01549A6NIU2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-2.15□□□□□ -2.75
LINC01549A6NIU2 AC092447.3-201ENST00000426027 686 ntBASIC-2.16□□□□□ -2.76
LINC01549A6NIU2 CALM2P2-201ENST00000428512 440 ntBASIC-2.16□□□□□ -2.76
LINC01549A6NIU2 SNORD57-201ENST00000448188 72 ntBASIC-2.16□□□□□ -2.76
LINC01549A6NIU2 AC116353.2-201ENST00000505332 712 ntBASIC-2.16□□□□□ -2.76
LINC01549A6NIU2 RNU6-377P-201ENST00000515965 102 ntBASIC-2.16□□□□□ -2.76
LINC01549A6NIU2 SNORD38.3-201ENST00000516599 73 ntBASIC-2.16□□□□□ -2.76
LINC01549A6NIU2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-2.16□□□□□ -2.76
LINC01549A6NIU2 AC138207.3-201ENST00000585289 166 ntBASIC-2.16□□□□□ -2.76
LINC01549A6NIU2 RNU6-86P-201ENST00000606534 107 ntBASIC-2.16□□□□□ -2.76
LINC01549A6NIU2 AC091948.2-201ENST00000636510 279 ntBASIC-2.16□□□□□ -2.76
LINC01549A6NIU2 RNU5A-8P-201ENST00000364102 114 ntBASIC-2.17□□□□□ -2.76
LINC01549A6NIU2 RNU6-946P-201ENST00000383878 107 ntBASIC-2.17□□□□□ -2.76
LINC01549A6NIU2 SNORA51.10-201ENST00000384418 136 ntBASIC-2.17□□□□□ -2.76
LINC01549A6NIU2 RNU6-549P-201ENST00000384433 107 ntBASIC-2.17□□□□□ -2.76
LINC01549A6NIU2 SNORD56B-201ENST00000384713 71 ntBASIC-2.17□□□□□ -2.76
LINC01549A6NIU2 AC244505.6-201ENST00000452829 130 ntBASIC-2.17□□□□□ -2.76
LINC01549A6NIU2 AF250324.2-201ENST00000608299 610 ntBASIC-2.17□□□□□ -2.76
LINC01549A6NIU2 RNU4-32P-201ENST00000363404 141 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 RNU6-853P-201ENST00000364306 107 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 RNU6-901P-201ENST00000384593 106 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 MTCO3P19-201ENST00000415864 321 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 AL390729.2-201ENST00000416137 156 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 BX276092.1-201ENST00000427368 251 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 SNAP23P1-201ENST00000433229 246 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 MTCO3P8-201ENST00000453691 755 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 AC006435.5-201ENST00000624486 112 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 AC126544.2-201ENST00000625174 749 ntBASIC-2.18□□□□□ -2.76
LINC01549A6NIU2 RNU6-336P-201ENST00000364891 107 ntBASIC-2.19□□□□□ -2.76
LINC01549A6NIU2 SNORD115-44-201ENST00000365391 82 ntBASIC-2.19□□□□□ -2.76
LINC01549A6NIU2 RNU6-1122P-201ENST00000384449 107 ntBASIC-2.19□□□□□ -2.76
LINC01549A6NIU2 RNU6-1165P-201ENST00000410119 107 ntBASIC-2.19□□□□□ -2.76
LINC01549A6NIU2 RNU7-182P-201ENST00000459009 62 ntBASIC-2.19□□□□□ -2.76
LINC01549A6NIU2 RNU7-172P-201ENST00000517125 64 ntBASIC-2.19□□□□□ -2.76
LINC01549A6NIU2 AC023632.1-201ENST00000518463 375 ntBASIC-2.19□□□□□ -2.76
LINC01549A6NIU2 AC115989.2-201ENST00000578640 563 ntBASIC-2.19□□□□□ -2.76
LINC01549A6NIU2 MTND1P7-201ENST00000632801 297 ntBASIC-2.19□□□□□ -2.76
LINC01549A6NIU2 Y_RNA.142-201ENST00000363491 102 ntBASIC-2.2□□□□□ -2.76
LINC01549A6NIU2 MIR518F-201ENST00000384973 87 ntBASIC-2.2□□□□□ -2.76
LINC01549A6NIU2 MIR518B-201ENST00000385127 83 ntBASIC-2.2□□□□□ -2.76
LINC01549A6NIU2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-2.2□□□□□ -2.76
LINC01549A6NIU2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-2.2□□□□□ -2.76
LINC01549A6NIU2 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-2.2□□□□□ -2.76
LINC01549A6NIU2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-2.2□□□□□ -2.76
LINC01549A6NIU2 SNORA43.4-201ENST00000629559 138 ntBASIC-2.2□□□□□ -2.76
LINC01549A6NIU2 AL445523.1-201ENST00000451184 1362 ntBASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 RNU6-1115P-201ENST00000362490 106 ntBASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 Y_RNA.167-201ENST00000363735 109 ntBASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 SNORD115-42-201ENST00000364273 82 ntBASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 MIR570-201ENST00000384917 97 ntBASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 AF186996.7-201ENST00000492781 209 ntBASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 RNA5SP33-201ENST00000516687 98 ntBASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 AC023510.2-201ENST00000622162 746 ntBASIC-2.21□□□□□ -2.76
LINC01549A6NIU2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 SNORD68-201ENST00000363214 84 ntBASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 Y_RNA.452-201ENST00000384202 108 ntBASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 Y_RNA.495-201ENST00000384435 112 ntBASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 Y_RNA.498-201ENST00000384460 102 ntBASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 MIR517B-201ENST00000385102 67 ntBASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 SNORD110-201ENST00000408189 75 ntBASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 RPL23AP30-201ENST00000432419 501 ntBASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-2.22□□□□□ -2.76
LINC01549A6NIU2 Y_RNA.148-201ENST00000363557 117 ntBASIC-2.23□□□□□ -2.77
LINC01549A6NIU2 RNU6-926P-201ENST00000384075 107 ntBASIC-2.23□□□□□ -2.77
LINC01549A6NIU2 SNORD64-201ENST00000386683 67 ntBASIC-2.23□□□□□ -2.77
LINC01549A6NIU2 RNU4-83P-201ENST00000410863 133 ntBASIC-2.23□□□□□ -2.77
LINC01549A6NIU2 RNU5A-5P-201ENST00000411054 116 ntBASIC-2.23□□□□□ -2.77
LINC01549A6NIU2 MIR4762-201ENST00000585261 75 ntBASIC-2.23□□□□□ -2.77
LINC01549A6NIU2 AP000907.4-201ENST00000604143 237 ntBASIC-2.23□□□□□ -2.77
LINC01549A6NIU2 MIR382-201ENST00000637119 76 ntBASIC-2.23□□□□□ -2.77
LINC01549A6NIU2 RNU6-1157P-201ENST00000384456 106 ntBASIC-2.24□□□□□ -2.77
LINC01549A6NIU2 RNU6-900P-201ENST00000384498 102 ntBASIC-2.24□□□□□ -2.77
LINC01549A6NIU2 MT-TF-201ENST00000387314 71 ntBASIC-2.24□□□□□ -2.77
LINC01549A6NIU2 AL031779.1-201ENST00000415663 330 ntBASIC-2.24□□□□□ -2.77
LINC01549A6NIU2 USP9YP16-201ENST00000430287 407 ntBASIC-2.24□□□□□ -2.77
LINC01549A6NIU2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-2.24□□□□□ -2.77
LINC01549A6NIU2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-2.24□□□□□ -2.77
LINC01549A6NIU2 RNU2-11P-201ENST00000459191 187 ntBASIC-2.24□□□□□ -2.77
LINC01549A6NIU2 AC010655.3-201ENST00000478818 450 ntBASIC-2.24□□□□□ -2.77
LINC01549A6NIU2 AC022137.1-201ENST00000483735 151 ntBASIC-2.24□□□□□ -2.77
LINC01549A6NIU2 AC072039.2-201ENST00000608883 439 ntBASIC-2.24□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms