Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
TRAV27A0A087WT01 SNORD50.1-201ENST00000362987 71 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 SNORD115-32-201ENST00000364079 82 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 RNU4-9P-201ENST00000364951 139 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 RNU6-517P-201ENST00000384362 110 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 RNU6-933P-201ENST00000384424 107 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 MIR570-201ENST00000384917 97 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 MIR153-2-201ENST00000385225 87 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 PDCL2P1-201ENST00000419302 352 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 MTCYBP8-201ENST00000422855 651 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 RNU6-63P-201ENST00000516690 95 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 AL157687.1-201ENST00000554853 619 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 AC090897.1-201ENST00000580909 226 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 MIR548AR-201ENST00000582191 57 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 MIR2909-201ENST00000617113 69 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 AC009161.2-201ENST00000624626 138 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 AC010608.3-201ENST00000625048 527 ntBASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRAV27A0A087WT01 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 RNU6-280P-201ENST00000364145 104 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 MIR513B-201ENST00000385136 84 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 MT-TN-201ENST00000387400 73 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 RNU6-159P-201ENST00000391080 106 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 MIR938-201ENST00000401216 83 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 MTCYBP4-201ENST00000401524 249 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 AC069271.1-201ENST00000445577 156 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 AC079354.2-201ENST00000453523 154 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 SNORD45.4-201ENST00000516629 73 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 MTND4P7-201ENST00000523876 130 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 AC133485.4-201ENST00000561835 220 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 AC245014.2-201ENST00000603689 287 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 AC246785.4-201ENST00000605374 287 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 AL357078.3-201ENST00000607528 618 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 AC067863.3-201ENST00000624172 122 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.36□□□□□ -2.47
TRAV27A0A087WT01 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 MIR214-201ENST00000385214 110 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 AC133104.1-201ENST00000429100 218 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 TRBVB-201ENST00000477100 408 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 MTCO1P29-201ENST00000496868 288 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 RNU6-189P-201ENST00000516120 101 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 RNA5SP268-201ENST00000516828 124 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 AP000753.3-201ENST00000604083 169 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 AC008536.2-201ENST00000607284 349 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 AC107308.1-201ENST00000615897 301 ntBASIC-0.37□□□□□ -2.47
TRAV27A0A087WT01 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 RNU6-181P-201ENST00000363225 107 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 RNU6-756P-201ENST00000383997 107 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 SNORA40.3-201ENST00000390964 122 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 MTCO2P33-201ENST00000402100 465 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 BX295541.1-201ENST00000417774 250 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 MLLT10P1-201ENST00000418346 262 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 AL606489.2-201ENST00000433886 234 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 AL353572.1-201ENST00000442490 417 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 RN7SKP287-201ENST00000516546 266 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 RNU6-445P-201ENST00000516949 107 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 AL391834.2-201ENST00000609982 546 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 AP001506.1-201ENST00000615444 211 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.38□□□□□ -2.47
TRAV27A0A087WT01 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 RNA5SP117-201ENST00000365294 118 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 RNA5SP128-201ENST00000365305 116 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 MIR329-2-201ENST00000385029 84 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 AL354751.2-201ENST00000415471 210 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 BTF3P11-201ENST00000426582 477 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 MTCO2P16-201ENST00000436962 677 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 AL356010.1-201ENST00000456364 102 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 RNU7-102P-201ENST00000458948 62 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 MIR3684-201ENST00000579779 74 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 PIGPP4-201ENST00000584447 307 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 MIR5692C1-201ENST00000585309 91 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 AL121757.2-201ENST00000611223 313 ntBASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
TRAV27A0A087WT01 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.4□□□□□ -2.47
TRAV27A0A087WT01 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.4□□□□□ -2.47
TRAV27A0A087WT01 RNU6-125P-201ENST00000384505 107 ntBASIC-0.4□□□□□ -2.47
TRAV27A0A087WT01 RNY3P9-201ENST00000384727 106 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms