Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AC091178.2-201ENST00000584401 117 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 MIR6767-201ENST00000637302 66 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
COMMD3-BMI1R4GMX3 SNORA27.1-201ENST00000362604 124 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.157-201ENST00000363638 102 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 SNORA20B-201ENST00000384220 132 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.573-201ENST00000384763 105 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 MTND4LP16-201ENST00000440828 295 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 LINC01399-202ENST00000458450 244 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNA5SP20-201ENST00000515976 84 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-107P-201ENST00000516643 102 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC093023.1-201ENST00000547375 507 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC108706.1-201ENST00000611053 297 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 RMST_2.1-201ENST00000617263 136 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC022079.1-201ENST00000621546 602 ntBASIC0.67□□□□□ -2.3
COMMD3-BMI1R4GMX3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.9-201ENST00000362354 101 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.38-201ENST00000362617 102 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.533-201ENST00000384596 114 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 Y_RNA.559-201ENST00000384686 107 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-780P-201ENST00000391030 104 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 U8.16-201ENST00000391279 133 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 AL139396.1-201ENST00000421137 167 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 CALM2P4-201ENST00000430810 426 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 SNORD5.1-201ENST00000458800 75 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU7-12P-201ENST00000516030 62 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 RNU6-917P-201ENST00000516294 104 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 AC027279.3-201ENST00000625055 122 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 CASC19-280ENST00000642102 1351 ntBASIC0.66□□□□□ -2.3
COMMD3-BMI1R4GMX3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
COMMD3-BMI1R4GMX3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.3
COMMD3-BMI1R4GMX3 MIR373-201ENST00000362273 69 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNA5SP361-201ENST00000362686 118 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU6-833P-201ENST00000363486 107 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNY4P14-201ENST00000363656 96 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 Y_RNA.194-201ENST00000363985 102 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 MIR548J-201ENST00000408833 112 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU5A-5P-201ENST00000411054 116 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 Z83846.1-201ENST00000446798 265 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 MTND1P17-201ENST00000448961 204 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU7-90P-201ENST00000459216 62 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC027419.1-201ENST00000522976 328 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC004832.4-201ENST00000608952 331 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC024614.3-201ENST00000637860 256 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC073544.1-201ENST00000600110 1595 ntBASIC0.65□□□□□ -2.31
COMMD3-BMI1R4GMX3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU6-593P-201ENST00000364716 112 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 Y_RNA.364-201ENST00000365532 101 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU6-969P-201ENST00000383900 105 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU6-1145P-201ENST00000384246 107 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU6-376P-201ENST00000384731 106 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 MIR190B-201ENST00000401119 79 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 MIR873-201ENST00000401120 77 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC018865.2-201ENST00000423631 129 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 EIF1P2-201ENST00000428233 350 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 AL445305.1-201ENST00000432577 575 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 FABP5P4-201ENST00000437203 171 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC093019.1-201ENST00000443135 252 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 AL137792.2-201ENST00000443484 235 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 UQCRBP2-201ENST00000447827 297 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC091021.1-201ENST00000468051 388 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU6-314P-201ENST00000516574 104 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU6-1314P-201ENST00000517139 104 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 MIR5701-3-201ENST00000578890 82 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 MIR5701-1-201ENST00000585138 82 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC005828.6-201ENST00000606610 232 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC104465.1-201ENST00000611365 139 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 MIR5701-2-201ENST00000615634 82 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC104260.1-201ENST00000616660 539 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 MIR7111-201ENST00000619751 72 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 AC127459.3-201ENST00000624328 466 ntBASIC0.64□□□□□ -2.31
COMMD3-BMI1R4GMX3 SNORA1B-201ENST00000362535 133 ntBASIC0.63□□□□□ -2.31
COMMD3-BMI1R4GMX3 SNORD116-2-201ENST00000384274 95 ntBASIC0.63□□□□□ -2.31
COMMD3-BMI1R4GMX3 RNU6-163P-201ENST00000384396 106 ntBASIC0.63□□□□□ -2.31
COMMD3-BMI1R4GMX3 SNORD116-6-201ENST00000384711 96 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms