Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 Y_RNA.717-201ENST00000517106 92 ntBASIC0.36□□□□□ -2.35
USH1CQ9Y6N9 RNU6-1116P-201ENST00000517269 99 ntBASIC0.36□□□□□ -2.35
USH1CQ9Y6N9 AC145350.1-201ENST00000567426 208 ntBASIC0.36□□□□□ -2.35
USH1CQ9Y6N9 MIR5696-201ENST00000578474 85 ntBASIC0.36□□□□□ -2.35
USH1CQ9Y6N9 7SK.7-201ENST00000603504 247 ntBASIC0.36□□□□□ -2.35
USH1CQ9Y6N9 AC073114.1-201ENST00000612027 490 ntBASIC0.36□□□□□ -2.35
USH1CQ9Y6N9 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.36□□□□□ -2.35
USH1CQ9Y6N9 SEPT14P17-201ENST00000617978 177 ntBASIC0.36□□□□□ -2.35
USH1CQ9Y6N9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.36□□□□□ -2.35
USH1CQ9Y6N9 Y_RNA.179-201ENST00000363844 90 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 RNU6-280P-201ENST00000364145 104 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 RNU6-95P-201ENST00000384697 107 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 AC243428.1-201ENST00000421099 264 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 Z98949.2-201ENST00000440996 144 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 DAP3P1-201ENST00000441522 278 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 AC093019.1-201ENST00000443135 252 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 RPS20P10-201ENST00000451209 253 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 RNU7-66P-201ENST00000459469 62 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 AC092989.1-201ENST00000481235 277 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 RNU6-1291P-201ENST00000516591 104 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 MTND4LP26-201ENST00000518144 282 ntBASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.35□□□□□ -2.35
USH1CQ9Y6N9 Y_RNA.135-201ENST00000363439 95 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 Y_RNA.296-201ENST00000364930 108 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 Y_RNA.336-201ENST00000365307 109 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 RNU6-117P-201ENST00000365415 107 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 Y_RNA.372-201ENST00000365599 102 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 SNORA20B-201ENST00000384220 132 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 RNU6-163P-201ENST00000384396 106 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 RNU6-376P-201ENST00000384731 106 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 RNU1-119P-201ENST00000391122 165 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 MIR891A-201ENST00000401237 79 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 ZNF885P-201ENST00000420174 1098 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 RN7SKP298-201ENST00000515950 94 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 RNU6-1110P-201ENST00000516462 101 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 AC011195.1-201ENST00000578177 177 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 AL138726.1-201ENST00000614873 333 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 AC097520.1-201ENST00000624435 385 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 AL008636.1-201ENST00000625038 1018 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 MIR924-201ENST00000638017 53 ntBASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.34□□□□□ -2.36
USH1CQ9Y6N9 SNORA25.3-201ENST00000363205 127 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 RNU6-833P-201ENST00000363486 107 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 RNU5F-3P-201ENST00000363767 117 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 Y_RNA.409-201ENST00000383990 98 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 SNORA36.2-201ENST00000384004 127 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 MIR1185-1-201ENST00000408598 86 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 RNA5SP222-201ENST00000411039 105 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 AL590632.1-201ENST00000424289 371 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 ERLEC1P1-201ENST00000433806 578 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 AC067940.1-201ENST00000458411 300 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 RNU6-956P-201ENST00000458868 103 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 AC002350.1-201ENST00000490759 375 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 Y_RNA.665-201ENST00000516177 98 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 AL358944.1-201ENST00000528537 144 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 AL158211.1-201ENST00000566763 763 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 POLR3GP2-201ENST00000588366 668 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 AC068137.3-201ENST00000639191 341 ntBASIC0.33□□□□□ -2.36
USH1CQ9Y6N9 SNORA27.1-201ENST00000362604 124 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 RNA5SP325-201ENST00000363756 130 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 RNU6-407P-201ENST00000365280 104 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 RNU6-281P-201ENST00000384212 103 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 RNU6-1067P-201ENST00000384752 107 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 MTCYBP10-201ENST00000424905 650 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 MTCO1P19-201ENST00000443487 500 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 PCMTD1P1-201ENST00000455560 355 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 AC018710.1-201ENST00000506509 158 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 AC121247.2-201ENST00000604776 136 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 AC005828.6-201ENST00000606610 232 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 RNU6-94P-201ENST00000607728 107 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 AC010999.1-201ENST00000611856 324 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 AL136317.1-201ENST00000612653 226 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 MIR6516-201ENST00000630554 81 ntBASIC0.32□□□□□ -2.36
USH1CQ9Y6N9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 Y_RNA.481-201ENST00000384373 102 ntBASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 Y_RNA.553-201ENST00000384670 102 ntBASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 MIR517A-201ENST00000385001 87 ntBASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 RNU6-1068P-201ENST00000410958 103 ntBASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 ELOCP21-201ENST00000412558 336 ntBASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 AC018865.2-201ENST00000423631 129 ntBASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 AC244098.3-201ENST00000424803 96 ntBASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 AL137792.2-201ENST00000443484 235 ntBASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 AC046134.1-201ENST00000514454 666 ntBASIC0.31□□□□□ -2.36
USH1CQ9Y6N9 RN7SKP164-201ENST00000516138 266 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms