Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 RNU6-191P-201ENST00000516295 94 ntBASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 SNORA27.4-201ENST00000516650 95 ntBASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.82-201ENST00000363000 102 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.92-201ENST00000363043 102 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.217-201ENST00000364214 105 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.235-201ENST00000364412 102 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.306-201ENST00000365015 102 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.312-201ENST00000365089 102 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.322-201ENST00000365151 102 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 RNY4P28-201ENST00000365281 93 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 SNORA80E-201ENST00000384744 137 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 AL357134.1-201ENST00000445848 426 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 SNORD2.1-201ENST00000458762 69 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.650-201ENST00000459002 102 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.641-201ENST00000459414 105 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 RNU6-498P-201ENST00000459468 107 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 AC026436.1-201ENST00000510537 270 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 RNU6-436P-201ENST00000516171 114 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.777-201ENST00000516982 102 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 AC026271.5-201ENST00000577873 130 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 MIR4658-201ENST00000584344 65 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.771-201ENST00000598668 102 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 DEFB117-201ENST00000602356 141 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 snoU13.31-201ENST00000607291 104 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.789-201ENST00000622480 102 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 snoZ196.1-201ENST00000625269 89 ntBASIC2.62□□□□□ -1.99
NR2E3Q9Y5X4 SNORA25.1-201ENST00000362326 128 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 RNU4-80P-201ENST00000363200 141 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.200-201ENST00000364018 102 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 SNORD115-30-201ENST00000364117 82 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.361-201ENST00000365515 120 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 RNU1-148P-201ENST00000384472 162 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 MIR489-201ENST00000384923 84 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 U8.13-201ENST00000390842 128 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 MIR1298-201ENST00000408783 112 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 MTCO1P44-201ENST00000441935 243 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 AC010531.2-201ENST00000465012 153 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 RNU6-155P-201ENST00000516347 100 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.700-201ENST00000516806 100 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 AC087441.2-201ENST00000529141 262 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 MIR3684-201ENST00000579779 74 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 AL162424.1-201ENST00000602325 221 ntBASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
NR2E3Q9Y5X4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.243-201ENST00000364481 109 ntBASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.297-201ENST00000364950 91 ntBASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 MTND5P15-201ENST00000434246 349 ntBASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 AL135790.2-201ENST00000437701 267 ntBASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 AC245102.2-201ENST00000448956 180 ntBASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 RNU6-221P-201ENST00000459541 99 ntBASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 SNORA81.3-201ENST00000517283 198 ntBASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 CBX3P4-201ENST00000538909 354 ntBASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 MIR3126-201ENST00000577443 74 ntBASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.6□□□□□ -1.99
NR2E3Q9Y5X4 AC016717.2-201ENST00000609089 5141 ntBASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 Y_RNA.329-201ENST00000365209 107 ntBASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 RNU6-418P-201ENST00000384035 107 ntBASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 RNU6-662P-201ENST00000384253 104 ntBASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 RNU6-1289P-201ENST00000384431 106 ntBASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 U3.40-201ENST00000408706 208 ntBASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 AC016717.1-201ENST00000448918 286 ntBASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 AC007336.1-201ENST00000576365 3828 ntBASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 AC005828.6-201ENST00000606610 232 ntBASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -1.99
NR2E3Q9Y5X4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NR2E3Q9Y5X4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NR2E3Q9Y5X4 Y_RNA.116-201ENST00000363292 103 ntBASIC2.58□□□□□ -2
NR2E3Q9Y5X4 Y_RNA.292-201ENST00000364904 97 ntBASIC2.58□□□□□ -2
NR2E3Q9Y5X4 SNORD14D-201ENST00000384390 87 ntBASIC2.58□□□□□ -2
NR2E3Q9Y5X4 MIR1262-201ENST00000408276 93 ntBASIC2.58□□□□□ -2
NR2E3Q9Y5X4 Y_RNA.626-201ENST00000411288 95 ntBASIC2.58□□□□□ -2
NR2E3Q9Y5X4 RNU6-57P-201ENST00000411348 103 ntBASIC2.58□□□□□ -2
NR2E3Q9Y5X4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.58□□□□□ -2
NR2E3Q9Y5X4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.58□□□□□ -2
NR2E3Q9Y5X4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.58□□□□□ -2
NR2E3Q9Y5X4 AC006380.1-201ENST00000603598 186 ntBASIC2.58□□□□□ -2
NR2E3Q9Y5X4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.58□□□□□ -2
NR2E3Q9Y5X4 AC098479.1-201ENST00000609225 154 ntBASIC2.58□□□□□ -2
NR2E3Q9Y5X4 AC004792.1-201ENST00000614523 137 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms