Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RNU6-651P-201ENST00000411040 105 ntBASIC3.61□□□□□ -1.83
GTF3C3Q9Y5Q9 RNU6-437P-201ENST00000459408 95 ntBASIC3.61□□□□□ -1.83
GTF3C3Q9Y5Q9 RN7SL863P-201ENST00000462370 296 ntBASIC3.61□□□□□ -1.83
GTF3C3Q9Y5Q9 SNORA28-201ENST00000606769 126 ntBASIC3.61□□□□□ -1.83
GTF3C3Q9Y5Q9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.61□□□□□ -1.83
GTF3C3Q9Y5Q9 Y_RNA.304-201ENST00000365011 112 ntBASIC3.6□□□□□ -1.83
GTF3C3Q9Y5Q9 SNORA54-201ENST00000384281 123 ntBASIC3.6□□□□□ -1.83
GTF3C3Q9Y5Q9 SNORA57.1-201ENST00000391227 145 ntBASIC3.6□□□□□ -1.83
GTF3C3Q9Y5Q9 AL133547.1-201ENST00000448546 220 ntBASIC3.6□□□□□ -1.83
GTF3C3Q9Y5Q9 AL049830.1-201ENST00000468034 425 ntBASIC3.6□□□□□ -1.83
GTF3C3Q9Y5Q9 RN7SL293P-201ENST00000481765 281 ntBASIC3.6□□□□□ -1.83
GTF3C3Q9Y5Q9 RNU6-794P-201ENST00000517261 64 ntBASIC3.6□□□□□ -1.83
GTF3C3Q9Y5Q9 MIR4287-201ENST00000579398 78 ntBASIC3.6□□□□□ -1.83
GTF3C3Q9Y5Q9 AC022217.4-201ENST00000604389 163 ntBASIC3.6□□□□□ -1.83
GTF3C3Q9Y5Q9 Y_RNA.802-201ENST00000614892 130 ntBASIC3.6□□□□□ -1.83
GTF3C3Q9Y5Q9 RNU6-674P-201ENST00000363831 107 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 Y_RNA.200-201ENST00000364018 102 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 RNY4P28-201ENST00000365281 93 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 SNORA8.3-201ENST00000384679 139 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 RNA5SP100-201ENST00000410903 110 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 RNA5SP59-201ENST00000410922 110 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 RNU6-1291P-201ENST00000516591 104 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 RNA5SP82-201ENST00000516707 92 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 MIR4724-201ENST00000579485 89 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 AC009779.6-201ENST00000603972 165 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 AC078938.1-201ENST00000620993 318 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 AC005336.3-201ENST00000623833 2679 ntBASIC3.59□□□□□ -1.83
GTF3C3Q9Y5Q9 RNA5SP276-201ENST00000362580 94 ntBASIC3.58□□□□□ -1.84
GTF3C3Q9Y5Q9 Y_RNA.199-201ENST00000364014 102 ntBASIC3.58□□□□□ -1.84
GTF3C3Q9Y5Q9 RNA5SP109-201ENST00000391010 116 ntBASIC3.58□□□□□ -1.84
GTF3C3Q9Y5Q9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.58□□□□□ -1.84
GTF3C3Q9Y5Q9 AC109925.1-201ENST00000478069 331 ntBASIC3.58□□□□□ -1.84
GTF3C3Q9Y5Q9 Y_RNA.714-201ENST00000517065 90 ntBASIC3.58□□□□□ -1.84
GTF3C3Q9Y5Q9 AL365265.1-201ENST00000621045 234 ntBASIC3.58□□□□□ -1.84
GTF3C3Q9Y5Q9 CTSLP2-204ENST00000629029 392 ntBASIC3.58□□□□□ -1.84
GTF3C3Q9Y5Q9 MIR367-201ENST00000362299 68 ntBASIC3.57□□□□□ -1.84
GTF3C3Q9Y5Q9 SNORA9.2-201ENST00000365361 133 ntBASIC3.57□□□□□ -1.84
GTF3C3Q9Y5Q9 MIR526A2-201ENST00000390198 65 ntBASIC3.57□□□□□ -1.84
GTF3C3Q9Y5Q9 RNU6-440P-201ENST00000390882 105 ntBASIC3.57□□□□□ -1.84
GTF3C3Q9Y5Q9 COX6CP10-201ENST00000416832 224 ntBASIC3.57□□□□□ -1.84
GTF3C3Q9Y5Q9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.57□□□□□ -1.84
GTF3C3Q9Y5Q9 AL773524.1-201ENST00000614065 229 ntBASIC3.57□□□□□ -1.84
GTF3C3Q9Y5Q9 MIR8054-201ENST00000620877 86 ntBASIC3.57□□□□□ -1.84
GTF3C3Q9Y5Q9 AL359837.1-201ENST00000381357 287 ntBASIC3.56□□□□□ -1.84
GTF3C3Q9Y5Q9 RNU6-296P-201ENST00000384608 107 ntBASIC3.56□□□□□ -1.84
GTF3C3Q9Y5Q9 MIR1298-201ENST00000408783 112 ntBASIC3.56□□□□□ -1.84
GTF3C3Q9Y5Q9 FTH1P12-201ENST00000432137 551 ntBASIC3.56□□□□□ -1.84
GTF3C3Q9Y5Q9 RPL23AP6-201ENST00000446637 472 ntBASIC3.56□□□□□ -1.84
GTF3C3Q9Y5Q9 RPS27P1-201ENST00000450552 247 ntBASIC3.56□□□□□ -1.84
GTF3C3Q9Y5Q9 RNU6-1007P-201ENST00000516586 107 ntBASIC3.56□□□□□ -1.84
GTF3C3Q9Y5Q9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GTF3C3Q9Y5Q9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GTF3C3Q9Y5Q9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 Y_RNA.203-201ENST00000364106 102 ntBASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 Y_RNA.265-201ENST00000364677 108 ntBASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 RNU6-360P-201ENST00000390944 104 ntBASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 RNA5SP482-201ENST00000391269 118 ntBASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 AC023449.1-201ENST00000454464 154 ntBASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 SNORD116-28-201ENST00000516123 91 ntBASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 SNORA74D-201ENST00000516404 141 ntBASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.55□□□□□ -1.84
GTF3C3Q9Y5Q9 Y_RNA.83-201ENST00000363005 113 ntBASIC3.54□□□□□ -1.84
GTF3C3Q9Y5Q9 RNU1-33P-201ENST00000364249 162 ntBASIC3.54□□□□□ -1.84
GTF3C3Q9Y5Q9 RNU6-1318P-201ENST00000365389 103 ntBASIC3.54□□□□□ -1.84
GTF3C3Q9Y5Q9 Y_RNA.626-201ENST00000411288 95 ntBASIC3.54□□□□□ -1.84
GTF3C3Q9Y5Q9 AL139156.1-201ENST00000412785 841 ntBASIC3.54□□□□□ -1.84
GTF3C3Q9Y5Q9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.54□□□□□ -1.84
GTF3C3Q9Y5Q9 RPL23AP63-201ENST00000498752 471 ntBASIC3.54□□□□□ -1.84
GTF3C3Q9Y5Q9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.54□□□□□ -1.84
GTF3C3Q9Y5Q9 ZNF720P1-201ENST00000562403 1939 ntBASIC3.53□□□□□ -1.84
GTF3C3Q9Y5Q9 SNORA16B-201ENST00000364674 135 ntBASIC3.53□□□□□ -1.84
GTF3C3Q9Y5Q9 AL034345.1-201ENST00000407768 123 ntBASIC3.53□□□□□ -1.84
GTF3C3Q9Y5Q9 AC009310.1-201ENST00000414414 451 ntBASIC3.53□□□□□ -1.84
GTF3C3Q9Y5Q9 AC108059.2-201ENST00000434626 151 ntBASIC3.53□□□□□ -1.84
GTF3C3Q9Y5Q9 AC091544.4-201ENST00000555268 342 ntBASIC3.53□□□□□ -1.84
GTF3C3Q9Y5Q9 JPX_2.1-201ENST00000614161 69 ntBASIC3.53□□□□□ -1.84
GTF3C3Q9Y5Q9 AL121772.2-201ENST00000614331 297 ntBASIC3.53□□□□□ -1.84
GTF3C3Q9Y5Q9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GTF3C3Q9Y5Q9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GTF3C3Q9Y5Q9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GTF3C3Q9Y5Q9 SNORA1B-201ENST00000362535 133 ntBASIC3.52□□□□□ -1.85
GTF3C3Q9Y5Q9 RNU6-1080P-201ENST00000383982 107 ntBASIC3.52□□□□□ -1.85
GTF3C3Q9Y5Q9 RNA5SP496-201ENST00000391240 109 ntBASIC3.52□□□□□ -1.85
GTF3C3Q9Y5Q9 AC244636.1-201ENST00000421152 228 ntBASIC3.52□□□□□ -1.85
GTF3C3Q9Y5Q9 RPS12P2-201ENST00000439728 269 ntBASIC3.52□□□□□ -1.85
GTF3C3Q9Y5Q9 AL606517.2-201ENST00000442855 241 ntBASIC3.52□□□□□ -1.85
GTF3C3Q9Y5Q9 AL929325.1-201ENST00000603096 117 ntBASIC3.52□□□□□ -1.85
GTF3C3Q9Y5Q9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.52□□□□□ -1.85
GTF3C3Q9Y5Q9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms