Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 SNORA11.2-201ENST00000408318 127 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 MIR1302-6-201ENST00000408466 90 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 RNU2-2P-201ENST00000410396 191 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 RNA5SP501-201ENST00000410990 112 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 RN7SKP192-201ENST00000411291 327 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 TRBV12-1-201ENST00000479785 344 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 AC090255.1-201ENST00000495779 349 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 AC025465.3-201ENST00000510570 311 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 RNU6-496P-201ENST00000516145 99 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 RNU6-436P-201ENST00000516171 114 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 RNU1-142P-201ENST00000516682 145 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2□□□□□ -2.09
CLDN16Q9Y5I7 AL096840.1-201ENST00000603287 93 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 AL162730.1-201ENST00000605734 292 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 AL353149.1-201ENST00000610667 244 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 U6.104-201ENST00000637979 90 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLDN16Q9Y5I7 CENPCP1-201ENST00000533085 2578 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 RNU6-505P-201ENST00000384427 107 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.581-201ENST00000391017 97 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 CST2P1-201ENST00000425770 87 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 MTND3P2-201ENST00000438452 342 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 MTND2P29-201ENST00000438595 412 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 MRPS10P1-201ENST00000448483 130 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 RPS29P21-201ENST00000496272 170 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 RNVU1-2-201ENST00000516326 135 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 DEFB117-201ENST00000602356 141 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 AC037487.3-201ENST00000606668 112 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 AL359075.3-201ENST00000613288 217 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN16Q9Y5I7 snoU2_19.2-201ENST00000363024 80 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 SNORD81.1-201ENST00000363064 77 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.124-201ENST00000363339 93 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.133-201ENST00000363428 110 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 SNORA8-201ENST00000384574 139 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.569-201ENST00000384749 103 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 MIR515-2-201ENST00000384883 83 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 MIR515-1-201ENST00000384884 83 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 snosnR66.1-201ENST00000391095 99 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 SNORA53-201ENST00000391141 249 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 RNA5SP212-201ENST00000391223 107 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 AL117342.1-201ENST00000404861 406 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 AC010154.1-201ENST00000425857 269 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 AC099677.2-201ENST00000436385 175 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 HSPE1P25-201ENST00000455484 251 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 RPL23AP42-201ENST00000471152 471 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 MIR4648-201ENST00000580107 72 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 MIR3145-201ENST00000580727 82 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 AC069114.2-201ENST00000604699 304 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 AC005828.6-201ENST00000606610 232 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 AL773524.1-201ENST00000614065 229 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 U6.73-201ENST00000619194 103 ntBASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLDN16Q9Y5I7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.84-201ENST00000363011 104 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 RNU6-290P-201ENST00000365212 101 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.376-201ENST00000365638 108 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.461-201ENST00000384263 103 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 SNORA48.1-201ENST00000390879 135 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 AC244636.1-201ENST00000421152 228 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 RPL23AP7-203ENST00000449021 469 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 TRBVB-201ENST00000477100 408 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 MTCO2P24-201ENST00000515611 426 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 RNU7-172P-201ENST00000517125 64 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 IGKV3-31-201ENST00000523109 329 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 RPL21P9-201ENST00000556149 474 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 MIR8062-201ENST00000621515 85 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 MIR6873-201ENST00000622788 63 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 AC022513.1-201ENST00000624512 117 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 MIR219B-201ENST00000637023 88 ntBASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN16Q9Y5I7 U8.2-201ENST00000363156 134 ntBASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 SNORA33-201ENST00000363664 130 ntBASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-514P-201ENST00000384208 107 ntBASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 Y_RNA.541-201ENST00000384640 113 ntBASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-376P-201ENST00000384731 106 ntBASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 RNU6-710P-201ENST00000410424 105 ntBASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 MTCYBP9-201ENST00000431021 303 ntBASIC1.96□□□□□ -2.1
CLDN16Q9Y5I7 RPS26P55-201ENST00000471178 356 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms