Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HMGN2P9-201ENST00000476875 229 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 AC234781.5-201ENST00000508429 271 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 SNORA70.12-201ENST00000516084 153 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 MIR3144-201ENST00000579460 79 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 MIR4753-201ENST00000585119 83 ntBASIC2.85□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-944P-201ENST00000364023 107 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 SNORA25.6-201ENST00000364121 118 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 Y_RNA.238-201ENST00000364441 102 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 RNU1-91P-201ENST00000364746 163 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 Y_RNA.341-201ENST00000365341 102 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 SNORA67.4-201ENST00000384688 142 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 MTCO2P33-201ENST00000402100 465 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 MIR1261-201ENST00000408659 82 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 MIR1185-2-201ENST00000408687 86 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 RNU2-2P-201ENST00000410396 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 AL135786.1-201ENST00000415892 214 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 RPS20P10-201ENST00000451209 253 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 RNU6-586P-201ENST00000517265 104 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 SUMO2P18-201ENST00000518873 252 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 MIR3684-201ENST00000579779 74 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 RNU2-4P-201ENST00000606190 192 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.15-201ENST00000611544 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.16-201ENST00000613119 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.12-201ENST00000613778 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.9-201ENST00000615427 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.11-201ENST00000616345 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.2-201ENST00000616535 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.3-201ENST00000617785 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.19-201ENST00000618602 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 RNU2-1-201ENST00000618664 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.6-201ENST00000619225 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.5-201ENST00000619465 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 U2.10-201ENST00000620268 191 ntBASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CTDP1Q9Y5B0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.293-201ENST00000364908 93 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.368-201ENST00000365547 113 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 SNORA72.4-201ENST00000384174 132 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 MIR218-1-201ENST00000384999 110 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 MIR1283-1-201ENST00000408494 87 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 RNU6-394P-201ENST00000410735 107 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 RPL30P4-201ENST00000429309 333 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 RNU7-57P-201ENST00000459540 60 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 AC114982.1-201ENST00000469402 321 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 AC104984.5-201ENST00000586878 94 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 AC013791.1-201ENST00000616619 62 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 AC134026.1-201ENST00000623249 2239 ntBASIC2.83□□□□□ -1.96
CTDP1Q9Y5B0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 RNU1-72P-201ENST00000362976 153 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 RNA5SP456-201ENST00000364002 114 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 RNU6-1048P-201ENST00000364054 107 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 RNU6-234P-201ENST00000365229 104 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 RNY1P5-201ENST00000383890 115 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.456-201ENST00000384232 111 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 RNU6-1135P-201ENST00000411083 103 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 RNU7-200P-201ENST00000516105 62 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 MTND5P41-201ENST00000517498 206 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 AC100767.1-201ENST00000528178 123 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 AL713866.2-201ENST00000603579 219 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.82□□□□□ -1.96
CTDP1Q9Y5B0 ZNF658B-202ENST00000615961 3375 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.121-201ENST00000363309 113 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.182-201ENST00000363880 111 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 RNU6-899P-201ENST00000363947 107 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.361-201ENST00000365515 120 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.398-201ENST00000383952 99 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 RNA5SP425-201ENST00000410336 112 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 Z98742.3-201ENST00000418637 326 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 RNU6-346P-201ENST00000516288 111 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 AC108706.1-201ENST00000611053 297 ntBASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.81□□□□□ -1.96
CTDP1Q9Y5B0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.310-201ENST00000365063 113 ntBASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.441-201ENST00000384123 112 ntBASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 RNU5E-9P-201ENST00000411164 104 ntBASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 AC121758.2-201ENST00000553271 193 ntBASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 MIR3124-201ENST00000582636 67 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 343.7 ms