Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RNU6-890P-201ENST00000384121 107 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.557-201ENST00000384680 107 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 MIR487A-201ENST00000385009 80 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-360P-201ENST00000390944 104 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU11-5P-201ENST00000391216 129 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SHANK1Q9Y566 SDAD1P3-201ENST00000427380 333 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 FTH1P12-201ENST00000432137 551 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RPL7P42-201ENST00000481005 679 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNA5SP395-201ENST00000516567 118 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.691-201ENST00000516611 103 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 SUMO2P18-201ENST00000518873 252 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.94□□□□□ -2.26
SHANK1Q9Y566 MIR4713-201ENST00000582691 75 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.94□□□□□ -2.26
SHANK1Q9Y566 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AL121655.1-201ENST00000605811 308 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AL359075.3-201ENST00000613288 217 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 MIR8074-201ENST00000615081 81 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 AC005562.2-201ENST00000618264 111 ntBASIC0.94□□□□□ -2.26
SHANK1Q9Y566 RNU6-1283P-201ENST00000365314 105 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.471-201ENST00000384312 102 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 RNA5SP100-201ENST00000410903 110 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 RNA5SP59-201ENST00000410922 110 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 RNU6-370P-201ENST00000411008 104 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC004386.2-201ENST00000441858 148 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 ELOCP24-201ENST00000456370 334 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 snoU13.6-201ENST00000458785 104 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC097473.1-201ENST00000508142 408 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 RNA5SP121-201ENST00000516537 101 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC005828.6-201ENST00000606610 232 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 MIR8054-201ENST00000620877 86 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC091925.1-201ENST00000623204 462 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC008873.1-201ENST00000625051 138 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 SNORA27.1-201ENST00000362604 124 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.80-201ENST00000362996 102 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 U3.8-201ENST00000363675 217 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.315-201ENST00000365117 102 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 MIR1253-201ENST00000408273 105 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.604-201ENST00000410574 102 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 MTATP6P23-201ENST00000440153 476 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC016717.1-201ENST00000448918 286 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC008834.1-201ENST00000511612 175 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC067942.3-201ENST00000512025 362 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 RNU6-58P-201ENST00000517143 103 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC093023.1-201ENST00000547375 507 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.93□□□□□ -2.26
SHANK1Q9Y566 AL606534.2-204ENST00000635008 178 ntBASIC0.93□□□□□ -2.26
SHANK1Q9Y566 MTND5P16-201ENST00000460269 1703 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.60-201ENST00000362831 98 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.405-201ENST00000383979 100 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.451-201ENST00000384200 100 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.482-201ENST00000384377 111 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 RNY3P4-201ENST00000384428 101 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.524-201ENST00000384564 100 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.561-201ENST00000384694 100 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 RNU6-376P-201ENST00000384731 106 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 MIR597-201ENST00000384968 97 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 MIR628-201ENST00000385229 95 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 RNA5SP212-201ENST00000391223 107 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 MIR934-201ENST00000401241 83 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 MIR1197-201ENST00000408818 88 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 AC018865.2-201ENST00000423631 129 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 AC245047.3-201ENST00000429428 127 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.92□□□□□ -2.26
SHANK1Q9Y566 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.92□□□□□ -2.26
SHANK1Q9Y566 snoU13.27-201ENST00000459278 104 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 SNORA31.17-201ENST00000516953 127 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 RNU6-264P-201ENST00000517134 104 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.92□□□□□ -2.26
SHANK1Q9Y566 AC009229.3-201ENST00000608056 282 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 AC126177.8-201ENST00000618339 1015 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 AL160413.1-201ENST00000622780 310 ntBASIC0.92□□□□□ -2.26
SHANK1Q9Y566 Y_RNA.287-201ENST00000364853 94 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 RNU6-318P-201ENST00000384283 103 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 RNU6-950P-201ENST00000384651 107 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AL117342.1-201ENST00000404861 406 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AC096920.1-201ENST00000423991 241 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AC245047.4-201ENST00000433189 144 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 HSPE1P13-201ENST00000451143 297 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AC010469.2-201ENST00000496412 480 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 MIR5695-201ENST00000579717 85 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AP001094.1-201ENST00000579805 193 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 AC087588.2-201ENST00000617667 426 ntBASIC0.91□□□□□ -2.26
SHANK1Q9Y566 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms